Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3053 and Atu3054 are separated by 408 nucleotidesAtu3054 and Atu3055 are separated by 199 nucleotidesAtu3055 and Atu3056 are separated by 44 nucleotidesAtu3056 and Atu3057 are separated by 131 nucleotides Atu3053: Atu3053 - peptide ABC transporter ATPase, at 50,111 to 51,757 Atu3053 Atu3054: Atu3054 - hypothetical protein, at 52,166 to 53,335 Atu3054 Atu3055: Atu3055 - hypothetical protein, at 53,535 to 54,800 Atu3055 Atu3056: Atu3056 - beta 1,3 glucan synthase catalytic subunit, at 54,845 to 56,809 Atu3056 Atu3057: Atu3057 - hypothetical protein, at 56,941 to 58,398 Atu3057
Group Condition Atu3053 Atu3054 Atu3055 Atu3056 Atu3057
stress R2A with Nickel (II) chloride 0.05 mM -0.5 -0.7 -0.5 -0.3 -0.5
stress R2A with Gallium(III) chloride 0.02 mM -0.7 -0.8 -0.4 -0.2 -0.3
stress R2A with Carbenicillin 150 mM -0.5 -0.7 -0.3 -0.3 -0.4
stress R2A with G418 disolution 0.02 mM -0.6 -0.7 -0.3 -0.2 -0.5
stress R2A with silver chloride 5 mM -0.5 -0.5 -0.4 -0.4 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.7 -0.3 +0.3 +0.2
phage AgroPhage_C04 +0.5 +0.3 -0.1 +0.5 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.3 +0.5 +0.3 +0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.3 +0.4 +0.5 +0.3
stress Pyrogallol 0.5 mM +0.4 +0.5 +0.3 +0.5 +0.3
Atjh2 +0.3 +0.4 +0.2 +0.4 +0.7
lb_sorghum_leaf LB_sorghum_leaf +0.5 +0.3 +0.5 +0.4 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.3 +0.5 +0.3 +0.4
phage AgroPhage_C10 +0.4 +0.5 +0.2 +0.6 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.6 +0.1 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.2 +0.5 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.4 +0.4 +0.5
nophagecontrol No phage control +0.4 +0.4 +0.5 +0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.4 +0.6 +0.4 +0.5
nophagecontrol No phage control +0.5 +0.6 +0.2 +0.6 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.3 +0.6 +0.4 +0.4
lb_sorghum_leaf LB_sorghum_leaf +0.5 +0.4 +0.7 +0.4 +0.5
lb_sorghum_leaf LB_sorghum_leaf +0.5 +0.5 +0.5 +0.5 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.3 +0.6 +0.5 +0.4
nophagecontrol No phage control +0.6 +0.7 +0.2 +0.5 +0.5
lb_sorghum_leaf LB_sorghum_leaf +0.5 +0.5 +0.5 +0.5 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.6 +0.6 +0.4 +0.5
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.6 +0.5 +0.6 +0.5 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.8 +0.5 +0.4 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.6 +0.7 +0.5 +0.6
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