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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu3045 and Atu3046 are separated by 66 nucleotides
Atu3046 and Atu3047 are separated by 11 nucleotides
Atu3047 and Atu3048 are separated by 41 nucleotides
Atu3048 and Atu3049 are separated by 129 nucleotides
Atu3045: Atu3045 - hypothetical protein, at 41,736 to 42,083
Atu3045
Atu3046: Atu3046 - oxidoreductase, at 42,150 to 43,475
Atu3046
Atu3047: Atu3047 - oligopeptide ABC transporter permease, at 43,487 to 44,377
Atu3047
Atu3048: Atu3048 - oligopeptide ABC transporter permease, at 44,419 to 45,369
Atu3048
Atu3049: Atu3049 - oligopeptide ABC transporter substrate-binding protein, at 45,499 to 47,160
Atu3049
Group
Condition
Atu3045
Atu3046
Atu3047
Atu3048
Atu3049
stress
R2A with Gallium(III) chloride 0.02 mM
-0.7
-0.5
-0.5
-0.5
-0.3
stress
R2A with Ferric chloride 0.1 mM
-0.8
-0.3
-0.7
-0.2
-0.5
stress
R2A with Aluminum chloride 0.3 mM
-0.8
-0.3
-0.4
-0.4
-0.4
stress
R2A with Chromium(III) Chloride Hexahydrate 0.02 mM
-0.6
-0.4
-0.6
-0.4
-0.2
phage
phage 100.2
-0.8
-0.4
-0.1
-0.7
-0.2
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.8
-0.2
-0.7
-0.1
-0.3
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
+0.2
-0.4
+0.6
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.7
+0.3
-0.5
+0.8
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.5
+0.6
+0.6
-0.3
phage
AgroPhage_F04
+0.4
+0.3
+0.3
+0.9
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
+0.3
-0.2
+0.2
+0.5
carbon source
Sucrose (C)
+0.5
+0.4
+0.4
+0.3
+0.3
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.8
+0.5
+0.9
+0.0
-0.1
lb_arabidopsis_leaf
LB_arabidopsis_leaf
+0.2
+0.5
+0.4
+0.5
+0.5
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.4
+0.2
+0.5
+0.5
+0.5
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.8
+0.7
-0.2
+0.5
+0.3
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.2
+0.4
+0.4
+0.6
+0.5
phage
AgroPhage_F03
+0.5
+0.4
+0.5
+0.5
+0.4
phage
AgroPhage_H03
+0.6
+0.2
+0.4
+0.6
+0.4
carbon source
Betanin (C)
+0.6
+0.4
+0.4
+0.5
+0.4
carbon source
Methyl alpha-D-glucopyranoside (C)
+0.6
+0.4
+0.4
+0.5
+0.4
carbon source
Betanin (C)
+0.3
+0.6
+0.5
+0.4
+0.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
+0.5
+0.5
+0.4
+0.6
phage
AgroPhage_C04
+1.1
+0.7
-0.1
+0.4
+0.5
nophagecontrol
No phage control
+0.5
+0.6
+0.3
+0.8
+0.5
nophagecontrol
No phage control
+0.7
+0.5
+0.7
+0.5
+0.3
phage
AgroPhage_C10
+0.6
+0.5
+1.0
+0.9
+0.3
nophagecontrol
No phage control
+0.9
+0.6
+0.5
+0.8
+0.6
nophagecontrol
No phage control
+0.9
+0.8
+0.4
+0.9
+0.6
phage
AgroPhage_E10
+0.9
+0.5
+0.6
+0.8
+0.9
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