Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3045 and Atu3046 are separated by 66 nucleotidesAtu3046 and Atu3047 are separated by 11 nucleotidesAtu3047 and Atu3048 are separated by 41 nucleotidesAtu3048 and Atu3049 are separated by 129 nucleotides Atu3045: Atu3045 - hypothetical protein, at 41,736 to 42,083 Atu3045 Atu3046: Atu3046 - oxidoreductase, at 42,150 to 43,475 Atu3046 Atu3047: Atu3047 - oligopeptide ABC transporter permease, at 43,487 to 44,377 Atu3047 Atu3048: Atu3048 - oligopeptide ABC transporter permease, at 44,419 to 45,369 Atu3048 Atu3049: Atu3049 - oligopeptide ABC transporter substrate-binding protein, at 45,499 to 47,160 Atu3049
Group Condition Atu3045 Atu3046 Atu3047 Atu3048 Atu3049
stress R2A with Gallium(III) chloride 0.02 mM -0.7 -0.5 -0.5 -0.5 -0.3
stress R2A with Ferric chloride 0.1 mM -0.8 -0.3 -0.7 -0.2 -0.5
stress R2A with Aluminum chloride 0.3 mM -0.8 -0.3 -0.4 -0.4 -0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.02 mM -0.6 -0.4 -0.6 -0.4 -0.2
phage phage 100.2 -0.8 -0.4 -0.1 -0.7 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.2 -0.7 -0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 -0.4 +0.6 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.3 -0.5 +0.8 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 +0.6 +0.6 -0.3
phage AgroPhage_F04 +0.4 +0.3 +0.3 +0.9 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +0.3 -0.2 +0.2 +0.5
carbon source Sucrose (C) +0.5 +0.4 +0.4 +0.3 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.5 +0.9 +0.0 -0.1
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.2 +0.5 +0.4 +0.5 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.2 +0.5 +0.5 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.7 -0.2 +0.5 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.4 +0.4 +0.6 +0.5
phage AgroPhage_F03 +0.5 +0.4 +0.5 +0.5 +0.4
phage AgroPhage_H03 +0.6 +0.2 +0.4 +0.6 +0.4
carbon source Betanin (C) +0.6 +0.4 +0.4 +0.5 +0.4
carbon source Methyl alpha-D-glucopyranoside (C) +0.6 +0.4 +0.4 +0.5 +0.4
carbon source Betanin (C) +0.3 +0.6 +0.5 +0.4 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.5 +0.5 +0.4 +0.6
phage AgroPhage_C04 +1.1 +0.7 -0.1 +0.4 +0.5
nophagecontrol No phage control +0.5 +0.6 +0.3 +0.8 +0.5
nophagecontrol No phage control +0.7 +0.5 +0.7 +0.5 +0.3
phage AgroPhage_C10 +0.6 +0.5 +1.0 +0.9 +0.3
nophagecontrol No phage control +0.9 +0.6 +0.5 +0.8 +0.6
nophagecontrol No phage control +0.9 +0.8 +0.4 +0.9 +0.6
phage AgroPhage_E10 +0.9 +0.5 +0.6 +0.8 +0.9
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