Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3041 and Atu3042 are separated by 115 nucleotidesAtu3042 and Atu3043 overlap by 4 nucleotidesAtu3043 and Atu3044 are separated by 44 nucleotidesAtu3044 and Atu3045 are separated by 65 nucleotides Atu3041: Atu3041 - dipeptide ABC transporter substrate-binding protein, at 36,341 to 37,954 Atu3041 Atu3042: Atu3042 - hypothetical protein, at 38,070 to 39,146 Atu3042 Atu3043: Atu3043 - hydantoinase beta subunit-like protein, at 39,143 to 40,681 Atu3043 Atu3044: Atu3044 - asparaginase, at 40,726 to 41,670 Atu3044 Atu3045: Atu3045 - hypothetical protein, at 41,736 to 42,083 Atu3045
Group Condition Atu3041 Atu3042 Atu3043 Atu3044 Atu3045
phage phage 95.1 -0.6 -1.0 -0.1 -0.6 -0.7
stress R2A with Ferric chloride 0.1 mM -0.5 -0.5 -0.4 -0.8 -0.8
stress R2A with Gallium(III) chloride 0.02 mM -0.6 -0.6 -0.5 -0.4 -0.7
r2a_control R2A control -0.4 -0.5 -0.3 -0.7 -0.7
stress R2A with Manganese (II) chloride tetrahydrate 5 mM -0.5 -0.4 -0.5 -0.6 -0.5
r2a_control R2A control -0.3 -0.3 -0.4 -0.7 -0.6
stress R2A with Cobalt chloride 0.02 mM -0.5 -0.2 -0.4 -0.6 -0.5
stress R2A with Chromium(III) Chloride Hexahydrate 0.02 mM -0.4 -0.6 -0.4 -0.3 -0.6
stress R2A with Carbenicillin 150 mM -0.5 -0.7 -0.3 -0.5 -0.2
stress R2A with Nickel (II) chloride 0.05 mM -0.6 -0.5 -0.5 -0.5 -0.1
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.6 -0.4 -0.3 -0.5 -0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.8 -0.1 +0.3 +0.7
carbon source L-Fucose (C) +0.4 +0.4 +0.5 +0.5 +0.4
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.4 +0.5 +0.3 +0.5 +0.5
carbon source L-Fucose (C) +0.4 +0.4 +0.5 +0.5 +0.3
phage AgroPhage_E10 +0.3 +0.2 +0.3 +0.5 +0.9
carbon source Betanin (C) +0.5 +0.5 +0.3 +0.4 +0.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 +0.3 +0.7 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.5 +1.0 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.7 +0.5 +0.4 +0.3
carbon source Methyl alpha-D-glucopyranoside (C) +0.5 +0.6 +0.5 +0.3 +0.6
nophagecontrol No phage control +0.5 +0.8 +0.6 -0.2 +0.9
nophagecontrol No phage control +0.4 +0.7 +0.5 +0.5 +0.5
carbon source Sucrose (C) +0.5 +0.5 +0.6 +0.5 +0.5
phage AgroPhage_C10 +0.5 +0.6 +0.3 +0.6 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.2 +0.9 +0.5 +0.5
nophagecontrol No phage control +0.6 +0.6 +0.4 +0.6 +0.7
phage AgroPhage_C04 +0.5 +0.6 +0.5 +0.5 +1.1
carbon source Betanin (C) +0.8 +0.8 +0.7 +0.7 +0.3
nophagecontrol No phage control +0.6 +0.7 +0.6 +0.6 +0.9
remove
Atu3041
plot
remove
Atu3042
plot
remove
Atu3043
remove
Atu3044
plot
remove
Atu3045
plot