Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3038	Atu3039	Atu3040	Atu3041	Atu3042
	No phage control	-0.6	-0.7	-0.7	-0.5	-0.7
stress	R2A with tungstate 375 mM	-0.6	-0.4	-0.6	-0.2	-1.0
stress	R2A with Nickel (II) chloride 0.05 mM	-0.5	-0.5	-0.6	-0.6	-0.5
stress	R2A with Ferric chloride 0.1 mM	-0.5	-0.5	-0.5	-0.5	-0.5
stress	R2A with silver chloride 5 mM	-0.4	-0.5	-0.5	-0.4	-0.7
stress	R2A with Manganese (II) chloride tetrahydrate 5 mM	-0.4	-0.6	-0.6	-0.5	-0.4
stress	R2A with Gallium(III) chloride 0.02 mM	-0.3	-0.5	-0.5	-0.6	-0.6
phage	phage 95.1	-0.4	-0.2	-0.3	-0.6	-1.0
phage	phage 99.2	-0.4	-0.4	-0.6	-0.4	-0.6
phage	Phage 97.2 + bacteria	-0.5	-0.5	-0.5	-0.5	-0.3
stress	R2A with Carbenicillin 150 mM	-0.2	-0.4	-0.4	-0.5	-0.7
stress	R2A with arsenate 50 mM	-0.5	-0.5	-0.5	-0.4	-0.3
lb_sorghum_leaf	LB_sorghum_leaf	+0.3	+0.4	+0.6	+0.4	+0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.7	+0.4	+0.2	+0.4	+0.5
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.4	+0.3	+0.3	+0.5	+0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	+0.5	+0.5	+0.6	+0.2
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+0.5	+0.4	+0.5	+0.4	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	+0.7	+0.4	+0.5	+0.4
lb_arabidopsis_leaf	LB_arabidopsis_leaf	+0.5	+0.6	+0.5	+0.6	+0.3
phage	AgroPhage_C10	+0.6	+0.6	+0.3	+0.5	+0.6
phage	AgroPhage_C04	+0.4	+0.7	+0.3	+0.5	+0.6
carbon source	Betanin (C)	+0.6	+0.6	+0.4	+0.5	+0.5
carbon source	Sucrose (C)	+0.5	+0.5	+0.5	+0.5	+0.5
nophagecontrol	No phage control	+0.4	+0.5	+0.5	+0.5	+0.8
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.7	+0.6	+0.2	+0.6
nophagecontrol	No phage control	+0.3	+0.4	+0.8	+0.6	+0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.6	+0.4	+0.5	+0.5	+0.7
nophagecontrol	No phage control	+0.5	+0.5	+0.8	+0.4	+0.7
nophagecontrol	No phage control	+0.7	+0.5	+0.8	+0.6	+0.7
carbon source	Betanin (C)	+0.9	+0.8	+0.7	+0.8	+0.8