Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3027	Atu3028	Atu3029	Atu3030	Atu3031
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.1	-0.1	-0.1	-3.6
stress	R2A with silver chloride 5 mM	-0.7	-0.3	-0.3	-0.6	-2.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.0	-0.1	-0.7	-2.9
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.2	-0.3	+0.6	-4.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	-0.0	-0.3	-2.8
phage	Phage 97.2 + bacteria	-0.7	-0.7	-0.8	-0.7	-0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.5	-0.1	+0.1	-2.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.3	-0.0	-0.0	-2.7
	No phage control	-0.4	-0.7	-0.5	-1.0	+0.8
carbon source	D-Galacturonic Acid (C)	+0.8	+0.7	+0.7	+0.6	+0.3
carbon source	palatinose (C)	+0.5	+0.8	+0.6	+0.7	+0.6
carbon source	D-(-)-lyxose (C)	+0.8	+0.6	+0.8	+0.5	+0.5
carbon source	D-Cellobiose (C)	+0.7	+0.6	+0.6	+0.6	+0.7
carbon source	L-Sorbose (C)	+0.8	+0.8	+0.7	+0.6	+0.5
carbon source	Lactitol (C)	+0.7	+0.6	+0.6	+0.7	+0.8
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.7	+0.9	+0.7	+0.5	+0.7
carbon source	D-Maltose (C)	+0.7	+0.5	+0.7	+0.7	+0.9
carbon source	Cellotetraose (C)	+0.7	+0.7	+0.8	+0.6	+0.6
carbon source	Betanin (C)	+0.9	+0.9	+0.8	+0.5	+0.4
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+0.8	+0.7	+0.8	+0.7	+0.5
carbon source	Xylitol (C)	+0.8	+0.9	+0.8	+0.7	+0.6
phage	AgroPhage_A07	+0.6	+0.6	+0.3	+0.7	+1.5
carbon source	Sucrose (C)	+1.0	+0.9	+0.8	+0.6	+0.6
nophagecontrol	No phage control	+0.9	+0.7	+0.5	+0.8	+1.3
nophagecontrol	No phage control	+0.8	+0.8	+0.6	+1.1	+1.1
phage	AgroPhage_C04	+0.5	+0.8	+0.5	+0.7	+2.0
nophagecontrol	No phage control	+0.7	+0.8	+0.7	+1.0	+1.4
nophagecontrol	No phage control	+0.9	+0.4	+0.9	+1.3	+1.3
carbon source	Betanin (C)	+1.2	+0.9	+1.2	+0.9	+0.7
phage	AgroPhage_C10	+0.7	+0.8	+0.8	+1.1	+1.8