Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3021 and Atu3022 overlap by 4 nucleotidesAtu3022 and Atu3023 are separated by 11 nucleotidesAtu3023 and Atu3024 are separated by 60 nucleotidesAtu3024 and Atu3025 are separated by 71 nucleotides Atu3021: Atu3021 - sugar ABC transporter ATPase, at 13,412 to 14,527 Atu3021 Atu3022: Atu3022 - sugar ABC transporter permease, at 14,524 to 15,453 Atu3022 Atu3023: Atu3023 - sugar ABC transporter permease, at 15,465 to 16,346 Atu3023 Atu3024: Atu3024 - sugar ABC transporter permease, at 16,407 to 17,936 Atu3024 Atu3025: Atu3025 - oligo alginate lyase, at 18,008 to 20,338 Atu3025
Group Condition Atu3021 Atu3022 Atu3023 Atu3024 Atu3025
carbon source L-Fucose (C) +1.0 +0.9 +0.9 +0.8 +0.6
carbon source Cellotetraose (C) +0.9 +1.0 +0.9 +0.7 +0.7
carbon source palatinose (C) +1.0 +0.8 +1.0 +0.9 +0.6
carbon source L-Sorbose (C) +0.9 +0.8 +1.0 +0.7 +0.8
carbon source D-Maltose (C) +1.1 +0.9 +0.9 +0.8 +0.8
carbon source Lactulose (C) +1.1 +0.9 +0.9 +0.7 +0.8
carbon source D-Cellobiose (C) +1.0 +0.8 +1.1 +0.8 +0.6
carbon source D-Leucrose (C) +1.1 +1.0 +0.8 +0.8 +0.8
carbon source D-Galacturonic Acid (C) +1.0 +1.0 +0.9 +0.9 +0.8
carbon source Methyl alpha-D-glucopyranoside (C) +1.0 +1.0 +0.8 +0.9 +0.9
carbon source D-Trehalose (C) +1.1 +1.0 +1.1 +0.8 +0.7
carbon source D-(-)-lyxose (C) +1.0 +1.0 +1.0 +0.7 +0.9
carbon source Lactulose (C) +1.1 +0.9 +0.9 +0.9 +0.8
carbon source Betanin (C) +1.0 +0.9 +1.1 +0.9 +0.8
nophagecontrol No phage control +1.2 +0.9 +1.1 +0.8 +0.8
nophagecontrol No phage control +1.2 +1.0 +0.9 +0.8 +0.9
carbon source Lactitol (C) +1.1 +1.1 +1.0 +0.9 +0.9
carbon source Cellotetraose (C) +1.1 +1.0 +1.0 +0.9 +0.8
phage AgroPhage_C04 +1.3 +1.0 +1.0 +0.8 +0.8
carbon source Ribitol (C) +1.3 +1.1 +0.9 +0.9 +0.9
phage AgroPhage_C10 +1.1 +1.3 +0.8 +0.9 +1.2
carbon source Ribitol (C) +1.1 +1.2 +1.0 +1.0 +0.9
carbon source m-Inositol (C) +1.2 +1.2 +1.0 +0.9 +0.9
nophagecontrol No phage control +1.4 +1.2 +1.0 +0.9 +0.9
carbon source Xylitol (C) +1.2 +1.3 +1.1 +0.9 +0.9
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +1.3 +1.2 +1.1 +1.1 +0.9
nophagecontrol No phage control +1.4 +1.1 +1.2 +1.1 +0.9
carbon source Sucrose (C) +1.1 +1.2 +1.2 +1.1 +1.0
carbon source Lactitol (C) +1.4 +1.2 +1.3 +0.9 +0.9
carbon source Betanin (C) +1.5 +1.3 +1.4 +1.3 +1.2
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