Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3016	Atu3017	Atu3018	Atu3019	Atu3020
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-6.0	+0.0	-0.8	-0.2
phage	Phage 100.2 + bactiera	-0.9	-3.2	-0.8	-1.0	-0.9
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.2	-2.9	-1.7	-0.6	-0.4
stress	R2A with hypochlorite 6.25 mM	-0.6	-3.3	-0.9	-0.6	-0.6
phage	Phage 97.2 + bacteria	-1.1	-1.5	-1.0	-1.3	-1.0
phage	Phage 100.3 + bacteria	-1.0	-1.8	-1.1	-0.9	-0.8
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.0	-1.7	-0.9	-1.1	-0.7
phage	Phage 100.1 + bacteria	-0.8	-1.9	-0.8	-0.8	-1.0
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.4	-1.8	-1.1	-0.4	-0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.9	-1.7	-0.9	-0.9	-1.0
lb_maize	LB_Maize	-1.1	-1.2	-1.2	-1.0	-0.8
phage	AgroPhage_F04	+0.8	+2.5	+0.9	+0.9	+0.3
carbon source	Ribitol (C)	+1.4	+1.1	+1.0	+1.2	+1.0
phage	AgroPhage_C10	+0.8	+0.7	+1.8	+1.6	+0.9
carbon source	Lactitol (C)	+1.0	+1.4	+1.3	+1.2	+1.0
carbon source	D-Maltose (C)	+1.4	+1.7	+1.1	+1.0	+0.9
nophagecontrol	No phage control	+1.0	+1.0	+1.3	+1.4	+1.4
carbon source	m-Inositol (C)	+1.5	+1.2	+1.4	+1.2	+1.1
carbon source	Betanin (C)	+1.4	+1.6	+1.0	+1.3	+1.0
carbon source	Sucrose (C)	+1.5	+1.4	+1.4	+1.2	+1.0
nophagecontrol	No phage control	+1.4	+1.5	+1.1	+1.3	+1.0
carbon source	Ribitol (C)	+1.2	+1.6	+1.4	+1.2	+0.9
phage	AgroPhage_C04	+1.4	+1.1	+1.3	+1.8	+0.9
carbon source	Lactitol (C)	+1.5	+1.1	+1.5	+1.3	+1.2
carbon source	Methyl alpha-D-glucopyranoside (C)	+1.5	+1.8	+1.1	+1.1	+1.1
nophagecontrol	No phage control	+1.1	+1.7	+1.5	+1.3	+1.1
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+1.7	+1.2	+1.3	+1.3	+1.2
nophagecontrol	No phage control	+1.2	+1.6	+1.7	+1.4	+0.9
carbon source	Xylitol (C)	+1.8	+1.7	+1.3	+1.5	+0.9
carbon source	Betanin (C)	+1.6	+2.0	+1.6	+1.6	+1.4