Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3011	Atu3012	Atu3013	Atu3014	Atu3015
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.2	-1.4	-1.7	-3.8	-1.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.7	-1.8	-1.6	-1.4	-0.8
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-2.0	-1.1	-2.2	-1.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.6	-2.3	-0.9	-1.1	-1.1
lb_sorghum x50 665	LB_Sorghum X50 665	-2.0	-1.6	-1.4	-1.0	-0.9
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.8	-1.9	-1.1	-0.8	-1.1
lb_sorghum ss 20	LB_Sorghum SS 20	-1.6	-1.0	-1.4	-1.5	-1.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.3	-1.1	-1.8	+0.0	-1.3
lb control	LB control	-1.1	-2.1	-1.1	-0.9	-1.4
carbon source	D-Galactose (C)	+1.4	+0.9	+1.5	+1.9	+0.9
carbon source	D-Raffinose (C)	+1.5	+0.8	+1.4	+1.9	+0.9
carbon source	NAG (C)	+1.3	+1.6	+1.1	+1.5	+1.1
phage	AgroPhage_C04	+1.5	+1.1	+1.3	+1.4	+1.3
nophagecontrol	No phage control	+2.0	+1.2	+1.3	+0.9	+1.3
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+1.5	+1.4	+1.2	+1.4	+1.2
carbon source	Methyl alpha-D-glucopyranoside (C)	+1.7	+0.9	+1.5	+1.7	+1.2
carbon source	D-Cellobiose (C)	+1.8	+1.5	+1.1	+1.7	+1.0
carbon source	D-Trehalose (C)	+1.8	+1.1	+1.4	+1.8	+1.0
carbon source	m-Inositol (C)	+1.8	+1.2	+1.4	+1.7	+1.2
carbon source	Lactitol (C)	+1.8	+1.3	+1.4	+1.4	+1.3
nophagecontrol	No phage control	+1.6	+1.9	+1.8	+1.0	+1.0
phage	AgroPhage_C10	+1.8	+1.6	+1.1	+1.5	+1.3
carbon source	Betanin (C)	+2.2	+1.4	+1.3	+1.4	+1.2
carbon source	Cellotetraose (C)	+1.9	+1.3	+1.6	+1.5	+1.2
carbon source	Ribitol (C)	+2.1	+1.4	+1.5	+1.9	+1.0
carbon source	Ribitol (C)	+1.9	+1.4	+1.7	+1.8	+1.2
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+1.6	+1.7	+1.5	+1.8	+1.5
carbon source	Xylitol (C)	+2.2	+1.4	+1.5	+1.9	+1.4
carbon source	Lactitol (C)	+2.2	+1.8	+1.8	+1.7	+1.6
carbon source	Betanin (C)	+2.2	+1.8	+1.7	+2.0	+1.5