Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3010	Atu3011	Atu3012	Atu3013	Atu3014
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.6	-1.2	-1.4	-1.7	-3.8
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.5	-1.7	-1.8	-1.6	-1.4
lb_sorghum x50 665	LB_Sorghum X50 665	-1.5	-2.0	-1.6	-1.4	-1.0
lb_sorghum ss 20	LB_Sorghum SS 20	-1.5	-1.6	-1.0	-1.4	-1.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.1	-1.6	-2.3	-0.9	-1.1
carbon source	palatinose (C)	+1.3	+1.7	+1.4	+1.5	+0.9
carbon source	L-Fucose (C)	+1.3	+1.9	+0.8	+1.3	+1.4
phage	AgroPhage_C04	+1.6	+1.5	+1.1	+1.3	+1.4
nophagecontrol	No phage control	+1.5	+1.3	+1.4	+1.4	+1.2
carbon source	D-Galacturonic Acid (C)	+1.4	+1.5	+1.0	+1.3	+1.6
carbon source	D-Raffinose (C)	+1.2	+1.5	+0.8	+1.4	+1.9
carbon source	D-Galactose (C)	+1.2	+1.4	+0.9	+1.5	+1.9
carbon source	D-Quinic (C)	+1.4	+1.8	+0.8	+1.2	+1.7
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+1.4	+1.5	+1.4	+1.2	+1.4
nophagecontrol	No phage control	+1.6	+2.0	+1.2	+1.3	+0.9
carbon source	Methyl alpha-D-glucopyranoside (C)	+1.4	+1.7	+0.9	+1.5	+1.7
carbon source	D-Cellobiose (C)	+1.1	+1.8	+1.5	+1.1	+1.7
carbon source	D-Trehalose (C)	+1.5	+1.8	+1.1	+1.4	+1.8
carbon source	Lactitol (C)	+1.6	+1.8	+1.3	+1.4	+1.4
carbon source	m-Inositol (C)	+1.6	+1.8	+1.2	+1.4	+1.7
phage	AgroPhage_C10	+1.7	+1.8	+1.6	+1.1	+1.5
carbon source	Betanin (C)	+1.5	+2.2	+1.4	+1.3	+1.4
nophagecontrol	No phage control	+1.6	+1.6	+1.9	+1.8	+1.0
carbon source	Cellotetraose (C)	+1.6	+1.9	+1.3	+1.6	+1.5
carbon source	Ribitol (C)	+1.6	+1.9	+1.4	+1.7	+1.8
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+1.8	+1.6	+1.7	+1.5	+1.8
carbon source	Ribitol (C)	+1.6	+2.1	+1.4	+1.5	+1.9
carbon source	Xylitol (C)	+1.7	+2.2	+1.4	+1.5	+1.9
carbon source	Betanin (C)	+1.8	+2.2	+1.8	+1.7	+2.0
carbon source	Lactitol (C)	+2.1	+2.2	+1.8	+1.8	+1.7