Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2817 and Atu2818 are separated by 76 nucleotidesAtu2818 and Atu2819 are separated by 8 nucleotidesAtu2819 and Atu2821 are separated by 302 nucleotidesAtu2821 and Atu2822 are separated by 42 nucleotides Atu2817: Atu2817 - ABC transporter, substrate binding protein (ribose), at 2,820,108 to 2,821,049 Atu2817 Atu2818: Atu2818 - ABC transporter, membrane spanning protein (ribose), at 2,821,126 to 2,822,148 Atu2818 Atu2819: Atu2819 - ABC transporter, nucleotide binding/ATPase protein (ribose), at 2,822,157 to 2,823,674 Atu2819 Atu2821: Atu2821 - transcriptional regulator, GntR family, at 2,823,977 to 2,824,669 Atu2821 Atu2822: Atu2822 - D-galactarate dehydratase, at 2,824,712 to 2,826,244 Atu2822
Group Condition Atu2817 Atu2818 Atu2819 Atu2821 Atu2822
carbon source L-Galactose (C) -3.0 -3.7 -4.4 -1.5 -2.0
carbon source L-Galactose (C) -3.1 -3.9 -4.0 -1.5 -2.0
carbon source D-Arabinose (C) -2.2 -2.1 -2.4 -1.4 -3.4
carbon source D-Arabinose (C) -2.4 -2.2 -2.5 -1.0 -3.3
stress R2A with m-arsenite 0.8 mM -0.2 -0.2 -0.3 -4.9 +0.1
stress R2A with m-arsenite 0.8 mM -0.3 +0.0 +0.0 -4.8 -0.1
carbon source D-Galacturonic Acid (C) -0.1 -0.3 +0.1 -2.8 -0.2
carbon source L-Xylose (C) -0.3 -0.4 -0.1 -1.5 -1.1
carbon source L-Xylose (C) -0.2 +0.2 +0.0 -1.8 -1.2
carbon source L-Fucose (C) -0.7 -0.9 -0.9 -0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.3 -0.1 -2.3 -0.3
carbon source L-Fucose (C) -0.8 -1.0 -0.7 -0.0 -0.3
carbon source D-Saccharic potassium salt (C) -0.5 -0.3 -0.2 -1.5 -0.1
carbon source Gentibiose (C) -0.3 -0.1 -0.1 -1.5 -0.6
nitrogen source L-Ornithine (N) -0.4 -0.7 -0.4 -0.4 -0.4
carbon source D-Galacturonic Acid (C) +0.2 +0.1 +0.1 -2.1 -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 -0.0 -2.4 +0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -1.1 +0.3 -1.6 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 +0.1 +0.1 -2.1 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.1 +0.1 -1.9 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.9 -0.1 -2.3 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.1 +0.1 -1.7 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.4 -0.0 -1.8 +0.2
carbon source Xylitol (C) -0.1 -0.3 -0.1 +1.9 -0.2
carbon source Xylitol (C) -0.1 -0.5 -0.2 +2.4 +0.1
stress R2A with molybdate 400 mM -0.1 -0.3 -0.0 +1.7 +0.4
stress R2A with nitrate 375 mM -0.1 +0.2 +0.0 +2.1 +0.1
stress R2A with molybdate 400 mM +0.0 +0.2 +0.2 +1.4 +0.5
carbon source D-Ribose (C) -0.0 -0.0 -0.2 +4.8 +2.7
carbon source D-Ribose (C) +0.0 -0.1 -0.1 +5.0 +2.8
remove
Atu2817
plot		 remove
Atu2818
plot		 remove
Atu2819		 remove
Atu2821
plot		 remove
Atu2822
plot