Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2814 and Atu2815 are separated by 3 nucleotidesAtu2815 and Atu2816 are separated by 4 nucleotidesAtu2816 and Atu2817 are separated by 93 nucleotidesAtu2817 and Atu2818 are separated by 76 nucleotides Atu2814: Atu2814 - zinc-binding dehydrogenase, at 2,817,161 to 2,818,171 Atu2814 Atu2815: Atu2815 - hypothetical protein, at 2,818,175 to 2,818,996 Atu2815 Atu2816: Atu2816 - oxidoreductase, at 2,819,001 to 2,820,014 Atu2816 Atu2817: Atu2817 - ABC transporter, substrate binding protein (ribose), at 2,820,108 to 2,821,049 Atu2817 Atu2818: Atu2818 - ABC transporter, membrane spanning protein (ribose), at 2,821,126 to 2,822,148 Atu2818
Group Condition Atu2814 Atu2815 Atu2816 Atu2817 Atu2818
carbon source L-Galactose (C) -5.4 -5.8 -5.3 -3.1 -3.9
carbon source L-Galactose (C) -5.9 -4.8 -5.3 -3.0 -3.7
carbon source L-Fucose (C) -4.7 -2.8 -2.0 -0.8 -1.0
carbon source L-Fucose (C) -4.4 -3.0 -2.2 -0.7 -0.9
carbon source D-Arabinose (C) -0.1 -2.4 -2.7 -2.4 -2.2
carbon source D-Arabinose (C) -0.1 -2.0 -3.1 -2.2 -2.1
nitrogen source L-Ornithine (N) -0.2 -0.4 -0.5 -0.4 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.0 -0.5 -0.1 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.4 -0.2 -0.5 +0.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.7 -0.3 +0.1 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.6 -0.3 +0.3 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.3 -0.4 +0.3 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 -0.5 +0.5 -1.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.4 +0.2 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.9 -0.3 -0.2 +0.2 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.2 -0.4 +0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.0 -0.4 +0.4 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 -0.4 +0.3 -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 -0.1 -0.5 +0.1 +0.9
phage AgroPhage_D10 +0.4 -0.5 +0.3 -0.1 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 +0.1 +0.2 +0.0 +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.2 -0.3 +0.5 +0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 +0.5 -0.0 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.2 +0.3 +0.6 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 -0.2 +0.6 -0.0
nitrogen source DL-2-Aminobutyric (N) +0.2 -0.6 +0.3 +0.3 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -0.1 +0.1 +1.2
phage AgroPhage_C04 +0.5 -0.2 +0.6 +0.4 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +1.5 -0.2 +0.4 +0.4
carbon source L-Xylose (C) +1.4 +1.0 +0.5 -0.3 -0.4
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