Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2811 and Atu2812 are separated by 111 nucleotidesAtu2812 and Atu2813 are separated by 11 nucleotidesAtu2813 and Atu2814 overlap by 4 nucleotidesAtu2814 and Atu2815 are separated by 3 nucleotides Atu2811: Atu2811 - hypothetical protein, at 2,814,376 to 2,815,578 Atu2811 Atu2812: Atu2812 - hypothetical protein, at 2,815,690 to 2,816,019 Atu2812 Atu2813: Atu2813 - altronate oxidoreductase, at 2,816,031 to 2,817,164 Atu2813 Atu2814: Atu2814 - zinc-binding dehydrogenase, at 2,817,161 to 2,818,171 Atu2814 Atu2815: Atu2815 - hypothetical protein, at 2,818,175 to 2,818,996 Atu2815
Group Condition Atu2811 Atu2812 Atu2813 Atu2814 Atu2815
carbon source L-Fucose (C) -4.8 -3.5 -4.0 -4.7 -2.8
carbon source L-Fucose (C) -3.6 -4.2 -4.0 -4.4 -3.0
carbon source L-Galactose (C) -0.1 -0.2 -3.7 -5.4 -5.8
carbon source L-Galactose (C) -0.1 +0.3 -3.1 -5.9 -4.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 -0.2 -0.3 -1.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.9 -0.3 -0.4 -0.9 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.4 -0.5 -1.2 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 -0.2 -0.4 -0.8 -0.2
carbon source D-Arabinose (C) +0.0 +0.1 +0.0 -0.1 -2.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -0.8 -0.3 -0.7 -0.0
carbon source D-Arabinose (C) +0.1 -0.3 -0.0 -0.1 -2.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.4 -0.1 -0.7 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.0 -0.4 -0.8 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.7 -0.4 -0.1 -0.3 -0.5
nitrogen source Nicotinamide (N) -0.6 -0.6 -0.3 -0.4 -0.4
nitrogen source L-Ornithine (N) -0.1 -0.8 -0.3 -0.2 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 +0.0 -0.2 -0.8 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.1 -0.2 -0.8 -0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.6 -0.1 -0.5 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 +0.2 -0.8 -0.6
nitrogen source DL-2-Aminobutyric (N) -0.5 -0.5 +0.1 +0.2 -0.6
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 +0.4 -0.2 -0.4 -0.3
nophagecontrol No phage control -0.4 -0.3 -0.3 -0.2 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +1.1 -0.2 -0.3 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.8 -0.1 -0.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +1.1 +0.1 -0.7 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +1.2 -0.1 +0.2 -0.1
phage AgroPhage_C04 +0.1 +0.8 +0.5 +0.5 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +1.7 +0.3 -0.2 +1.5
carbon source L-Xylose (C) +0.1 -0.0 +0.7 +1.4 +1.0
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