Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2809 and Atu2810 overlap by 2 nucleotidesAtu2810 and Atu2811 overlap by 19 nucleotidesAtu2811 and Atu2812 are separated by 111 nucleotidesAtu2812 and Atu2813 are separated by 11 nucleotides Atu2809: Atu2809 - cobalamin biosynthesis protein, at 2,812,384 to 2,813,349 Atu2809 Atu2810: Atu2810 - cobalamin biosynthetic protein, at 2,813,348 to 2,814,394 Atu2810 Atu2811: Atu2811 - hypothetical protein, at 2,814,376 to 2,815,578 Atu2811 Atu2812: Atu2812 - hypothetical protein, at 2,815,690 to 2,816,019 Atu2812 Atu2813: Atu2813 - altronate oxidoreductase, at 2,816,031 to 2,817,164 Atu2813
Group Condition Atu2809 Atu2810 Atu2811 Atu2812 Atu2813
carbon source L-Fucose (C) -1.1 -0.5 -4.8 -3.5 -4.0
carbon source L-Fucose (C) -1.1 -0.6 -3.6 -4.2 -4.0
carbon source Propan-1-ol (C) -3.7 -1.8 +0.1 -0.6 -0.1
carbon source L-Galactose (C) -1.2 -0.7 -0.1 -0.2 -3.7
carbon source L-Galactose (C) -1.1 -0.5 -0.1 +0.3 -3.1
carbon source Propan-1-ol (C) -3.0 -1.3 +0.1 +0.1 -0.1
stress R2A with Chloride 700 mM -1.5 -1.8 +0.1 -0.4 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 -0.7 -0.7 -0.0 -0.4
carbon source m-Inositol (C) -1.8 -1.0 +0.0 -0.5 +0.1
stress R2A with Strontium chloride 750 mM -1.5 -1.4 -0.1 -0.2 +0.1
stress R2A with Calcium Chloride Dihydrate 87.5 mM -2.3 -0.6 +0.1 -0.2 -0.1
nitrogen source Glycine (N) -1.8 -0.5 -0.4 -0.2 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -1.3 -0.0 +0.1 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.5 -1.0 -0.2 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -0.6 -0.2 -0.2 +0.1
carbon source NAG (C) -2.0 -0.7 -0.1 +0.1 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.6 -0.5 -0.6 -0.1
nitrogen source Glycine (N) -1.6 -0.5 -0.1 -0.3 -0.1
carbon source D-Galacturonic Acid (C) -1.5 -0.9 -0.2 +0.0 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.2 -1.0 -0.2 -0.4
carbon source m-Inositol (C) -1.8 -0.7 -0.0 +0.1 +0.1
stress R2A with Calcium Chloride Dihydrate 87.5 mM -1.9 -0.5 +0.0 +0.1 -0.1
carbon source NAG (C) -2.2 -0.4 +0.1 +0.1 -0.0
stress R2A with hypochlorite 6.25 mM -1.7 -1.0 -0.1 +0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -0.5 -0.3 +0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.3 -0.6 -0.1 +1.2 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 -0.6 -0.0 +0.0 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 +0.0 -0.4 +0.6 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.3 -0.3 +1.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.0 -0.2 +1.7 +0.3
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