Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2781 and Atu2782 are separated by 214 nucleotidesAtu2782 and Atu2783 overlap by 4 nucleotidesAtu2783 and Atu2784 are separated by 131 nucleotidesAtu2784 and Atu2785 are separated by 40 nucleotides Atu2781: Atu2781 - GTP-binding protein, at 2,785,977 to 2,787,044 Atu2781 Atu2782: Atu2782 - acetyltransferase, at 2,787,259 to 2,787,849 Atu2782 Atu2783: Atu2783 - acetyltransferase, at 2,787,846 to 2,788,478 Atu2783 Atu2784: Atu2784 - 50S ribosomal protein L27, at 2,788,610 to 2,788,879 Atu2784 Atu2785: Atu2785 - 50S ribosomal protein L21, at 2,788,920 to 2,789,234 Atu2785
Group Condition Atu2781 Atu2782 Atu2783 Atu2784 Atu2785
nitrogen source L-Ornithine (N) N.D. -0.1 -2.4 N.D. N.D.
nitrogen source L-Ornithine (N) N.D. -0.3 -1.8 N.D. N.D.
phage AgroPhage_E10 N.D. -0.2 -1.3 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.9 N.D. N.D.
stress R2A with Tetracycline 0.002 mM N.D. -0.4 -0.7 N.D. N.D.
carbon source DL-glyceraldehyde (C) N.D. -0.2 -0.8 N.D. N.D.
nitrogen source D-Lysine (N) N.D. -0.1 -0.9 N.D. N.D.
nitrogen source L-Histidine (N) N.D. -0.2 -0.8 N.D. N.D.
nitrogen source D-Lysine (N) N.D. -0.3 -0.7 N.D. N.D.
in planta Bethi_Library_OD0.5_6week N.D. -0.1 -0.9 N.D. N.D.
carbon source D-glutamine (C) N.D. -0.1 -0.7 N.D. N.D.
nitrogen source L-Arginine (N) N.D. +0.1 -0.9 N.D. N.D.
stress Erythromycin 6.25 ug/mL N.D. +0.0 -0.8 N.D. N.D.
stress R2A with Vancomycin 0.009 mM N.D. +0.1 -0.8 N.D. N.D.
stress Chloramphenicol 12.5 ug/mL N.D. -0.3 +0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.8 -0.4 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 +0.7 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.7 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.7 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.5 +0.4 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.8 N.D. N.D.
carbon source D-Saccharic potassium salt (C) N.D. +0.2 +0.9 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 +0.4 N.D. N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.1 +0.9 N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 +0.3 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 +0.5 N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.4 +0.8 N.D. N.D.
phage AgroPhage_C10 N.D. +0.2 +1.2 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.7 +0.7 N.D. N.D.
phage AgroPhage_C04 N.D. +0.2 +1.2 N.D. N.D.
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