Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2778 and Atu2779 are separated by 42 nucleotidesAtu2779 and Atu2780 are separated by 37 nucleotidesAtu2780 and Atu2781 overlap by 4 nucleotidesAtu2781 and Atu2782 are separated by 214 nucleotides Atu2778: Atu2778 - nicotinic acid mononucleotide adenyltransferase, at 2,782,905 to 2,783,489 Atu2778 Atu2779: Atu2779 - gamma-glutamyl phosphate reductase, at 2,783,532 to 2,784,773 Atu2779 Atu2780: Atu2780 - gamma-glutamyl kinase, at 2,784,811 to 2,785,980 Atu2780 Atu2781: Atu2781 - GTP-binding protein, at 2,785,977 to 2,787,044 Atu2781 Atu2782: Atu2782 - acetyltransferase, at 2,787,259 to 2,787,849 Atu2782
Group Condition Atu2778 Atu2779 Atu2780 Atu2781 Atu2782
phage AgroPhage_F10 N.D. N.D. N.D. N.D. -0.6
stress Erythromycin 12.5 ug/mL N.D. N.D. N.D. N.D. -0.5
stress Erythromycin 12.5 ug/mL N.D. N.D. N.D. N.D. -0.5
stress R2A with Tetracycline 0.002 mM N.D. N.D. N.D. N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. N.D. N.D. -0.4
carbon source NAG (C) N.D. N.D. N.D. N.D. -0.4
carbon source D-Raffinose (C) N.D. N.D. N.D. N.D. -0.4
stress R2A with Carbenicillin 150 mM N.D. N.D. N.D. N.D. -0.3
phage Phage 95.1 + bacteria N.D. N.D. N.D. N.D. +0.3
stress R2A with Nalidixic 0.02 mM N.D. N.D. N.D. N.D. +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. N.D. N.D. +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.3
nitrogen source L-Valine (N) N.D. N.D. N.D. N.D. +0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. N.D. +0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. N.D. N.D. +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.4
Atjh2 N.D. N.D. N.D. N.D. +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. +0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. N.D. +0.8
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