Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2756 and Atu2757 are separated by 213 nucleotidesAtu2757 and Atu2758 are separated by 173 nucleotidesAtu2758 and Atu2759 are separated by 208 nucleotidesAtu2759 and Atu2760 are separated by 99 nucleotides Atu2756: Atu2756 - acyl-CoA thioesterase II, at 2,756,153 to 2,757,037 Atu2756 Atu2757: Atu2757 - nitrogen regulatory protein PII, at 2,757,251 to 2,757,601 Atu2757 Atu2758: Atu2758 - ammonium transporter, at 2,757,775 to 2,758,980 Atu2758 Atu2759: Atu2759 - putative ftsK cell division protein, at 2,759,189 to 2,761,864 Atu2759 Atu2760: Atu2760 - hypothetical protein, at 2,761,964 to 2,762,638 Atu2760
Group Condition Atu2756 Atu2757 Atu2758 Atu2759 Atu2760
nitrogen source Orotic (N) -0.3 -1.5 -0.9 N.D. N.D.
nitrogen source L-Ornithine (N) -0.2 -0.6 -1.2 N.D. N.D.
nitrogen source Hydantoin (N) +0.1 -1.0 -1.1 N.D. N.D.
nitrogen source Hydantoin (N) +0.0 -0.9 -1.1 N.D. N.D.
nitrogen source L-Threonine (N) -0.1 -0.8 -1.0 N.D. N.D.
nitrogen source L-Ornithine (N) -0.1 -0.7 -1.2 N.D. N.D.
nitrogen source Orotic (N) -0.0 -1.2 -0.6 N.D. N.D.
nitrogen source Nicotinamide (N) -0.2 -0.7 -0.7 N.D. N.D.
nitrogen source L-Threonine (N) +0.0 -0.7 -0.9 N.D. N.D.
nitrogen source Nicotinamide (N) +0.0 -0.7 -0.9 N.D. N.D.
nitrogen source 5-Aminolevulinic (N) -0.2 -0.6 -0.6 N.D. N.D.
nitrogen source 6-aminocaproic (N) -0.0 -0.6 -0.7 N.D. N.D.
nitrogen source D-Lysine (N) -0.1 -0.6 -0.5 N.D. N.D.
nitrogen source Glycine (N) -0.0 -0.5 -0.7 N.D. N.D.
nitrogen source 5-Aminovaleric (N) -0.0 -0.7 -0.5 N.D. N.D.
nitrogen source L-Pipecolic Acid (N) -0.1 -0.5 -0.6 N.D. N.D.
nitrogen source L-Arginine (N) -0.1 -0.5 -0.6 N.D. N.D.
nitrogen source 5-Aminolevulinic (N) +0.0 -0.4 -0.7 N.D. N.D.
nitrogen source L-Arginine (N) +0.1 -0.4 -0.7 N.D. N.D.
nitrogen source L-Isoleucine (N) +0.1 -0.9 -0.3 N.D. N.D.
nitrogen source nitrate (N) +0.1 -0.8 -0.2 N.D. N.D.
nitrogen source D-Lysine (N) +0.1 -0.5 -0.5 N.D. N.D.
phage phage 95.1 +0.2 +0.4 -0.8 N.D. N.D.
phage Phage 95.3 + bacteria +0.1 +0.4 -0.6 N.D. N.D.
phage Phage 95.3 + bacteria +0.3 +0.6 -0.2 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +1.1 -0.2 N.D. N.D.
phage Phage 95.3 + bacteria +0.4 +0.8 -0.2 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.6 +0.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +1.1 +0.1 N.D. N.D.
stress R2A with Vancomycin 0.009 mM +0.5 +0.4 +0.6 N.D. N.D.
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