Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2735 and Atu2736 are separated by 124 nucleotidesAtu2736 and Atu2737 are separated by 9 nucleotidesAtu2737 and Atu2738 overlap by 4 nucleotidesAtu2738 and Atu2739 are separated by 193 nucleotides Atu2735: Atu2735 - threonine dehydratase, at 2,730,631 to 2,731,605 Atu2735 Atu2736: Atu2736 - dihydroxy-acid dehydratase, at 2,731,730 to 2,733,514 Atu2736 Atu2737: Atu2737 - oxidoredutase, at 2,733,524 to 2,734,426 Atu2737 Atu2738: Atu2738 - nucleoside-diphosphate-sugar epimerase, at 2,734,423 to 2,735,409 Atu2738 Atu2739: Atu2739 - oxidoreductase, at 2,735,603 to 2,737,045 Atu2739
Group Condition Atu2735 Atu2736 Atu2737 Atu2738 Atu2739
carbon source L-ascorbate (C) +0.1 -0.2 -4.5 -2.0 +2.6
carbon source L-ascorbate (C) -0.0 -0.4 -4.1 -1.7 +2.6
phage AgroPhage_D04 -0.2 -0.7 -0.6 +0.1 -0.3
carbon source Ribitol (C) -0.3 -0.1 -0.9 -0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.3 -0.2 -0.8 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.0 +0.2 -0.8 -0.4
carbon source D-Ribose (C) +0.2 +0.1 -0.5 -0.8 -0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 -0.9 +0.2 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.1 -0.2 -0.5 -0.0
stress Chloramphenicol 12.5 ug/mL +0.2 -0.0 +0.7 -0.6 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 +0.0 +0.5 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.5 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.3 +0.6 -0.1 -0.1
no phage P2L5 -0.3 +0.1 +0.7 +0.5 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 +0.2 +0.5 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 -0.4 +0.6 -0.2 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.6 +0.7 -0.1 +0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 +0.6 +0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 -0.1 +0.2 +0.6 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +1.0 +0.1 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.0 -0.0 +0.8 +0.4
Atjh15 +0.2 +0.2 -0.1 +0.8 +0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 +0.2 -0.0 +0.4
nitrogen source DL-2-Aminobutyric (N) -0.3 +0.2 +0.1 +0.6 +0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 +0.1 +0.7 +0.7
Atjh2 +0.3 +0.2 +0.4 +0.4 +0.4
Atjh2 +0.3 +0.2 +0.5 +0.3 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.5 +0.3 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.1 +0.2 +1.0 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.4 +0.3 +0.2 +0.4
remove
Atu2735
plot		 remove
Atu2736
plot		 remove
Atu2737		 remove
Atu2738
plot		 remove
Atu2739
plot