Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu2677	Atu2678	Atu2679	Atu2680	Atu2681
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.7	-0.2	-0.1	+0.2	+0.1
nophagecontrol	No phage control	+0.5	-0.4	-0.2	-1.2	-0.2
carbon source	NAG (C)	-0.0	-1.3	+0.3	-0.1	+0.0
no phage	P4L4	-0.9	+0.4	-0.2	-0.2	+0.0
nitrogen source	L-Alanine (N)	+0.5	-0.7	+0.0	-0.5	-0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.3	-0.4	-0.6	+0.1
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.7	+0.6	-0.2	+0.5	+0.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.9	-0.5	+0.1	-0.9	+0.3
nitrogen source	Ethanolamine (N)	+0.3	-0.9	+0.2	+0.2	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.6	-0.4	-0.6	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	-0.3	+0.1	-0.5	+0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.5	-0.1	-0.0	+0.4
phage	AgroPhage_C10	-0.5	+0.1	-0.2	+0.7	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9	+0.5	+0.1	+0.7	+0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.5	+0.2	-0.0	+0.5
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.9	+0.1	-0.7	+0.0	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.6	+0.7	-0.0	+0.4	+0.3
lb_arabidopsis_leaf	LB_arabidopsis_leaf	+0.7	+0.5	-0.2	-0.2	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	+0.5	+0.4	-0.3	+0.4	-0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.3	+0.4	-0.4	-0.2
stress	R2A with Vancomycin 0.009 mM	-0.4	+0.2	+0.8	+0.1	+0.4
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.7	+0.7	-0.2	+0.1	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+2.2	-0.0	+0.0	-0.4	-0.1
phage	AgroPhage_F04	+1.1	+0.1	+0.0	+0.2	+0.3
stress	R2A with Vancomycin 0.009 mM	+0.2	-0.0	+0.4	+0.8	+0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	+0.2	+0.8	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+1.0	+0.6	-0.1	+0.4	+0.0
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.9	+0.2	+0.4	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.5	+0.0	-0.1	+0.5	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.3	+0.0	-0.1	+1.0	+0.3