Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2671 and Atu2672 are separated by 106 nucleotidesAtu2672 and Atu2673 are separated by 108 nucleotidesAtu2673 and Atu8182 are separated by 266 nucleotidesAtu8182 and Atu2675 are separated by 297 nucleotides Atu2671: Atu2671 - ABC transporter, membrane spanning protein, at 2,655,238 to 2,656,119 Atu2671 Atu2672: Atu2672 - hypothetical protein, at 2,656,226 to 2,657,179 Atu2672 Atu2673: Atu2673 - hypothetical protein, at 2,657,288 to 2,658,460 Atu2673 Atu8182: Atu8182 - hypothetical protein, at 2,658,727 to 2,659,230 Atu8182 Atu2675: Atu2675 - hypothetical protein, at 2,659,528 to 2,659,908 Atu2675
Group Condition Atu2671 Atu2672 Atu2673 Atu8182 Atu2675
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.1 +0.1 N.D. -0.7
phage AgroPhage_F04 -0.7 -0.6 +0.0 N.D. -0.4
carbon source m-Inositol (C) -0.0 -0.3 -0.3 N.D. -1.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.7 -0.1 N.D. -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.2 +0.0 N.D. -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +0.4 N.D. -1.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -0.4 N.D. -0.4
nitrogen source DL-2-Aminobutyric (N) -0.6 -0.5 -0.6 N.D. +0.6
stress R2A with m-arsenite 0.8 mM -0.3 +0.3 -0.5 N.D. -0.5
stress R2A with rubidium chloride 600 mM +0.1 +0.3 -1.1 N.D. -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.7 +0.3 N.D. -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.0 -0.9 +0.2 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.6 -0.1 N.D. +0.8
stress Streptomycin 200 ug/mL +0.5 +0.3 -1.0 N.D. +0.1
stress Streptomycin 200 ug/mL +0.5 +0.0 -0.8 N.D. +0.6
phage AgroPhage_E10 -0.1 -0.4 -0.2 N.D. +1.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.3 -0.0 N.D. +1.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.5 +0.3 N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 +0.3 N.D. +0.9
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.0 +0.4 +0.2 N.D. +0.9
stress Erythromycin 6.25 ug/mL -0.1 +0.0 +1.2 N.D. +0.3
stress Chloramphenicol 6.25 ug/mL -0.1 +0.0 +1.2 N.D. +0.3
stress Erythromycin 6.25 ug/mL +0.2 -0.1 +1.5 N.D. +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 -0.4 N.D. +2.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.9 +0.5 N.D. +1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +0.1 N.D. +1.3
stress Chloramphenicol 12.5 ug/mL -0.2 +0.1 +3.5 N.D. +0.0
stress Erythromycin 12.5 ug/mL -0.5 +0.1 +3.4 N.D. +0.6
stress Erythromycin 12.5 ug/mL +0.1 -0.1 +3.7 N.D. +0.2
stress Chloramphenicol 12.5 ug/mL -0.1 -0.4 +3.6 N.D. +1.2
remove
Atu2671
plot		 remove
Atu2672
plot		 remove
Atu2673		 remove
Atu8182
plot		 remove
Atu2675
plot