Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2662 and Atu2663 are separated by 215 nucleotidesAtu2663 and Atu2664 are separated by 150 nucleotidesAtu2664 and Atu2665 are separated by 246 nucleotidesAtu2665 and Atu2666 are separated by 23 nucleotides Atu2662: Atu2662 - acetyltransferase, at 2,644,520 to 2,645,026 Atu2662 Atu2663: Atu2663 - GTP-binding tyrosin phosphorylated protein, at 2,645,242 to 2,647,062 Atu2663 Atu2664: Atu2664 - peptidyl-dipeptidase, at 2,647,213 to 2,649,273 Atu2664 Atu2665: Atu2665 - transcriptional regulator, MarR family, at 2,649,520 to 2,649,978 Atu2665 Atu2666: Atu2666 - MFS permease, at 2,650,002 to 2,651,180 Atu2666
Group Condition Atu2662 Atu2663 Atu2664 Atu2665 Atu2666
phage AgroPhage_F03 -2.2 N.D. +0.3 -0.5 -0.6
nophagecontrol No phage control -2.4 N.D. +0.2 -0.2 -0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.7 N.D. -0.1 -0.1 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.7 N.D. -0.1 -0.1 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.0 N.D. +0.1 -0.0 +0.3
phage AgroPhage_E04 -1.5 N.D. +0.2 -0.7 -0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.1 N.D. -0.0 -0.4 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -2.1 N.D. +0.0 -0.1 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.3 N.D. -0.0 -0.2 +0.2
phage AgroPhage_C04 -1.9 N.D. +0.1 -0.3 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.5 N.D. -0.2 +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.9 N.D. +0.1 -0.4 +0.1
lb_lettuce_leaf LB_Lettuce_Leaf -2.2 N.D. +0.1 -0.1 +0.2
lb_cucumber_cotlyden LB_cucumber_cotlyden -1.9 N.D. +0.1 +0.0 -0.2
no phage P4L4 -2.0 N.D. +0.0 -0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -2.0 N.D. +0.1 -0.1 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.4 N.D. -0.1 +0.6 +0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.0 N.D. +0.1 +0.2 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.4 N.D. -0.1 +0.8 -0.0
stress R2A with Kanamycin sulfate 0.02 mM -2.0 N.D. -0.1 +0.0 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.0 N.D. +0.0 +0.1 +0.2
phage AgroPhage_C10 -1.8 N.D. +0.4 +0.3 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.5 N.D. +0.4 -0.0 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.5 N.D. +0.1 -0.4 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.7 N.D. -0.1 +0.6 +0.1
stress R2A with Chloride 800 mM -1.7 N.D. +0.2 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.2 N.D. +0.0 +0.9 +0.4
nitrogen source DL-2-Aminobutyric (N) -0.9 N.D. +0.2 -0.6 +0.6
stress R2A with hypochlorite 6.25 mM -1.1 N.D. -0.1 +0.9 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.9 N.D. +0.2 +0.7 -0.2
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