Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2631 and Atu2632 are separated by 126 nucleotidesAtu2632 and Atu2633 are separated by 63 nucleotidesAtu2633 and Atu2634 are separated by 44 nucleotidesAtu2634 and Atu2635 are separated by 69 nucleotides Atu2631: Atu2631 - hypothetical protein, at 2,614,951 to 2,615,451 Atu2631 Atu2632: Atu2632 - dihydrolipoamide dehydrogenase, at 2,615,578 to 2,616,984 Atu2632 Atu2633: Atu2633 - RhtB family transporter, at 2,617,048 to 2,617,662 Atu2633 Atu2634: Atu2634 - hypothetical protein, at 2,617,707 to 2,618,120 Atu2634 Atu2635: Atu2635 - dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, at 2,618,190 to 2,619,422 Atu2635
Group Condition Atu2631 Atu2632 Atu2633 Atu2634 Atu2635
phage AgroPhage_E04 -0.1 N.D. -2.6 -1.9 N.D.
stress R2A with m-arsenite 0.8 mM -0.0 N.D. -2.3 -1.5 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -3.5 -0.3 N.D.
phage AgroPhage_F04 +0.1 N.D. -2.9 -0.6 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. -1.0 -1.2 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. -2.7 -0.6 N.D.
Atjh10 -0.3 N.D. -0.9 -1.7 N.D.
nophagecontrol No phage control -0.7 N.D. -1.0 -1.2 N.D.
nophagecontrol No phage control -0.2 N.D. -1.2 -1.5 N.D.
phage AgroPhage_E10 -0.2 N.D. -3.9 +1.3 N.D.
stress Timentin 3.125 ug/mL -0.2 N.D. -0.6 -1.9 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.0 N.D. -2.0 -0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 N.D. -0.9 -1.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. -0.6 -1.8 N.D.
stress R2A with m-arsenite 0.8 mM +0.1 N.D. -1.9 -0.6 N.D.
lb LB -0.1 N.D. -0.9 -1.3 N.D.
lb_tomato_root LB_Tomato_root -0.5 N.D. -1.1 -0.7 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.2 N.D. -0.8 -1.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -1.3 -0.9 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. -0.8 -1.6 N.D.
phage AgroPhage_D10 +0.2 N.D. -1.3 -1.0 N.D.
phage AgroPhage_F10 -0.1 N.D. -2.3 +0.3 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 N.D. -1.1 -1.1 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.4 N.D. -1.3 +0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 N.D. +2.0 -0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 N.D. -0.4 +1.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 N.D. -0.8 +2.9 N.D.
stress R2A with Oxytetracycline 0.0002 mM +0.2 N.D. +1.0 +1.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 N.D. +3.0 +0.2 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. +1.9 +1.4 N.D.
remove
Atu2631
plot		 remove
Atu2632
plot		 remove
Atu2633		 remove
Atu2634
plot		 remove
Atu2635
plot