Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2628 and Atu2629 are separated by 80 nucleotidesAtu2629 and Atu2630 overlap by 23 nucleotidesAtu2630 and Atu2631 are separated by 47 nucleotidesAtu2631 and Atu2632 are separated by 126 nucleotides Atu2628: Atu2628 - site-specific recombinase, at 2,612,267 to 2,613,214 Atu2628 Atu2629: Atu2629 - hypothetical protein, at 2,613,295 to 2,614,392 Atu2629 Atu2630: Atu2630 - hypothetical protein, at 2,614,370 to 2,614,903 Atu2630 Atu2631: Atu2631 - hypothetical protein, at 2,614,951 to 2,615,451 Atu2631 Atu2632: Atu2632 - dihydrolipoamide dehydrogenase, at 2,615,578 to 2,616,984 Atu2632
Group Condition Atu2628 Atu2629 Atu2630 Atu2631 Atu2632
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.7 -0.6 N.D.
nophagecontrol No phage control N.D. -0.2 -0.4 -0.7 N.D.
phage AgroPhage_C04 N.D. -0.2 -0.4 -0.7 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -0.6 -0.2 N.D.
phage AgroPhage_A07 N.D. -0.0 -0.5 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.0 -0.7 -0.2 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.2 -0.9 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 -0.4 -0.4 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 -0.8 +0.1 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +0.7 -1.0 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 -0.3 -0.6 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.3 -0.2 -0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.4 -0.1 -0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 -0.5 +0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. +0.1 +0.4 -0.7 N.D.
stress R2A with Vancomycin 0.009 mM N.D. -0.7 +0.5 +0.0 N.D.
carbon source D-Maltose (C) N.D. -0.1 -0.4 +0.5 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.1 -0.3 +0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 +0.3 +0.3 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.5 -0.4 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +0.5 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.1 +0.6 -0.3 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.6 -0.4 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. -0.0 +0.9 -0.4 N.D.
no phage P5L5 N.D. -0.1 +0.5 +0.4 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.4 +0.3 +0.3 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.3 +0.3 +0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.1 +0.8 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 +0.2 +0.3 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 +0.6 -0.1 N.D.
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