Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2595 and Atu2596 are separated by 12 nucleotidesAtu2596 and Atu2597 are separated by 44 nucleotidesAtu2597 and Atu2598 are separated by 77 nucleotidesAtu2598 and Atu8181 are separated by 243 nucleotides Atu2595: Atu2595 - hypothetical protein, at 2,572,948 to 2,574,381 Atu2595 Atu2596: Atu2596 - beta-N-acetylhexosaminidase, at 2,574,394 to 2,576,313 Atu2596 Atu2597: Atu2597 - short-chain dehydrogenase, at 2,576,358 to 2,577,140 Atu2597 Atu2598: Atu2598 - transcriptional regulator, RpiR family, at 2,577,218 to 2,578,081 Atu2598 Atu8181: Atu8181 - hypothetical protein, at 2,578,325 to 2,578,810 Atu8181
Group Condition Atu2595 Atu2596 Atu2597 Atu2598 Atu8181
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.1 -0.3 -0.7
carbon source Betanin (C) +0.1 +0.0 -0.2 -0.1 -1.0
nitrogen source Carnitine Hydrochloride (N) -0.2 +0.1 -0.1 -0.3 -0.7
stress R2A with Tetracycline 0.002 mM -0.5 +0.0 -0.4 -0.5 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 +0.3 +0.3 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.0 +0.3 -0.8 -0.4
carbon source D-Saccharic potassium salt (C) -0.2 -0.0 -0.2 -0.6 +0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 -0.2 +0.1 -0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.1 -0.1 +0.2 -0.8 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 +0.2 -0.8 +0.6
nitrogen source DL-2-Aminobutyric (N) +0.4 -0.5 +0.5 +0.0 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.1 -0.2 -0.4 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.1 +0.2 -0.7 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.0 -0.1 -0.4 +0.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 +0.2 -0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.1 -0.2 -0.6 +1.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 +0.1 +0.4 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 +0.2 -0.4 +0.6
carbon source 4-Aminobutyric (C) +0.2 -0.0 +0.1 -0.4 +0.7
phage AgroPhage_C10 -0.1 -0.4 -0.0 -0.0 +1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +0.2 -0.2 -0.1 +0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.0 -0.2 +0.2 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 +0.2 -0.2 +1.2
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.1 -0.1 +1.2 +0.1
nitrogen source NAG (N) +0.4 +0.3 +0.1 +1.8 +0.6
nitrogen source NAG (N) +0.3 +0.4 +0.2 +2.0 +0.7
carbon source NAG (C) +0.7 +0.7 +0.2 +3.4 +0.8
carbon source NAG (C) +0.7 +0.8 +0.3 +3.5 +1.1
carbon source NAG (C) +1.2 +1.0 +0.6 +4.2 +1.0
carbon source NAG (C) +1.1 +1.1 +0.7 +4.0 +1.4
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