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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu2592 and Atu2593 overlap by 35 nucleotides
Atu2593 and Atu2594 are separated by 26 nucleotides
Atu2594 and Atu2595 are separated by 63 nucleotides
Atu2595 and Atu2596 are separated by 12 nucleotides
Atu2592: Atu2592 - hypothetical protein, at 2,569,795 to 2,570,946
Atu2592
Atu2593: Atu2593 - copper homeostasis protein, at 2,570,912 to 2,571,652
Atu2593
Atu2594: Atu2594 - MFS permease, at 2,571,679 to 2,572,884
Atu2594
Atu2595: Atu2595 - hypothetical protein, at 2,572,948 to 2,574,381
Atu2595
Atu2596: Atu2596 - beta-N-acetylhexosaminidase, at 2,574,394 to 2,576,313
Atu2596
Group
Condition
Atu2592
Atu2593
Atu2594
Atu2595
Atu2596
stress
Indole-3-butyric 5 mM
-4.6
+0.0
-0.1
-0.1
-0.0
stress
Pyrogallol 0.5 mM
-4.7
+0.1
-0.0
-0.0
-0.0
stress
Pyrogallol 0.5 mM
-4.2
+0.0
-0.0
+0.0
-0.0
stress
Indole-3-butyric 5 mM
-3.9
-0.1
-0.1
+0.0
-0.1
stress
Dodecyl Sulfate 0.2 mM
-3.7
+0.0
-0.0
-0.1
-0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-4.0
+0.0
+0.3
+0.0
+0.0
stress
R2A with Nalidixic 0.02 mM
-3.7
+0.0
-0.1
+0.0
+0.1
stress
R2A with hypochlorite 6.25 mM
-3.5
-0.1
+0.1
+0.0
-0.1
stress
R2A with Nitrofurantoin 0.4 mg/mL
-3.5
-0.1
+0.2
+0.1
-0.1
stress
R2A with Nalidixic 0.02 mM
-3.6
+0.2
+0.0
-0.0
+0.0
stress
R2A with hypochlorite 6.25 mM
-3.1
-0.2
-0.0
+0.1
-0.1
stress
methyl jasmonate 5 mM
-2.9
-0.0
-0.1
-0.0
-0.1
stress
D(+)-Carvone 5 mM
-2.7
-0.0
-0.1
-0.1
-0.1
stress
D(+)-Carvone 5 mM
-2.6
-0.3
-0.2
-0.1
-0.0
stress
R2A with Carbenicillin 150 mM
-3.5
+0.2
+0.1
+0.3
-0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.7
+0.4
+0.0
+0.2
+0.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.5
+0.5
+0.1
+0.2
-0.1
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-2.7
+0.0
+0.0
+0.0
-0.0
stress
R2A with Nitrofurantoin 0.4 mg/mL
-2.8
+0.1
+0.1
-0.1
+0.0
stress
Dodecyl Sulfate 0.2 mM
-2.7
+0.1
-0.1
-0.0
+0.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.0
+0.4
-0.1
+0.1
+0.0
stress
Cinnamic 1.25 mM
-2.5
+0.1
+0.0
-0.1
-0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.8
+0.3
-0.1
+0.2
+0.1
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
-2.3
+0.1
-0.1
+0.1
-0.1
stress
R2A with Cephalothin 0.9 mM
-2.6
+0.1
-0.0
+0.1
+0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.1
+0.4
+0.2
+0.3
+0.1
carbon source
NAG (C)
+0.9
+0.8
+0.7
+0.7
+0.7
carbon source
NAG (C)
+1.0
+0.9
+0.6
+0.7
+0.8
carbon source
NAG (C)
-0.0
+1.1
+0.9
+1.2
+1.0
carbon source
NAG (C)
+0.1
+1.1
+1.0
+1.1
+1.1
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