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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu8180 and Atu2582 are separated by 4 nucleotides
Atu2582 and Atu2583 are separated by 193 nucleotides
Atu2583 and Atu2584 overlap by 4 nucleotides
Atu2584 and Atu2585 overlap by 9 nucleotides
Atu8180: Atu8180 - hypothetical protein, at 2,556,308 to 2,556,790
Atu8180
Atu2582: Atu2582 - UDP-glucose/GDP-mannose dehydrogenase, at 2,556,795 to 2,558,069
Atu2582
Atu2583: Atu2583 - glycosyltransferase, at 2,558,263 to 2,559,360
Atu2583
Atu2584: Atu2584 - hypothetical protein, at 2,559,357 to 2,560,100
Atu2584
Atu2585: Atu2585 - hypothetical protein, at 2,560,092 to 2,560,931
Atu2585
Group
Condition
Atu8180
Atu2582
Atu2583
Atu2584
Atu2585
stress
Timentin 6.25 ug/mL
-5.5
-5.6
-5.6
-5.9
-4.3
stress
Timentin 6.25 ug/mL
-5.1
-5.5
-5.1
-5.9
-4.6
stress
R2A with Nitrofurantoin 0.4 mg/mL
-3.1
-5.2
-5.3
-4.7
-4.3
stress
Pyrogallol 0.5 mM
-1.2
-5.4
-4.6
-5.2
-5.1
stress
Chloramphenicol 12.5 ug/mL
-4.2
-4.0
-4.6
-5.4
-2.9
stress
Chloramphenicol 12.5 ug/mL
-2.9
-5.2
-3.9
-4.9
-3.2
stress
Indole-3-butyric 5 mM
-0.7
-4.9
-4.2
-5.9
-4.5
stress
Chloramphenicol 6.25 ug/mL
-1.9
-4.7
-4.6
-4.0
-4.5
stress
R2A with Nitrofurantoin 0.4 mg/mL
-2.7
-3.9
-4.0
-4.6
-3.4
stress
Chloramphenicol 6.25 ug/mL
-2.0
-4.0
-4.6
-3.7
-4.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-3.6
-4.3
-4.7
-5.5
stress
R2A with hypochlorite 6.25 mM
-1.5
-4.5
-3.8
-5.4
-2.8
stress
Hygromycin B 25 ug/mL
-0.1
-3.5
-4.2
-5.6
-3.8
stress
Pyrogallol 0.5 mM
-0.9
-4.0
-3.6
-3.8
-4.7
stress
Indole-3-butyric 5 mM
-0.6
-3.8
-3.8
-4.1
-4.2
stress
Dodecyl Sulfate 0.2 mM
+0.2
-3.8
-3.9
-3.8
-4.5
stress
R2A with hypochlorite 6.25 mM
-1.1
-3.7
-3.7
-3.9
-2.8
stress
R2A with Carbenicillin 150 mM
-1.1
-2.9
-3.5
-3.8
-3.4
stress
R2A with Nalidixic 0.02 mM
-0.8
-3.9
-3.3
-3.6
-3.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-2.9
-4.1
-3.7
-4.1
stress
Timentin 3.125 ug/mL
-1.2
-3.2
-3.2
-3.6
-3.0
stress
Timentin 3.125 ug/mL
-1.0
-3.2
-3.4
-3.0
-2.7
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
-2.3
-3.1
-2.9
-2.7
-2.4
stress
D(+)-Carvone 5 mM
-0.4
-2.9
-3.1
-3.3
-3.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.6
-2.7
-3.1
-3.2
-3.4
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
-1.9
-3.0
-3.0
-2.9
-2.1
stress
R2A with Nalidixic 0.02 mM
-0.5
-3.7
-2.9
-2.5
-3.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
-2.4
-3.0
-3.4
-3.8
stress
D(+)-Carvone 5 mM
-0.5
-3.1
-2.7
-2.7
-3.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
-2.4
-3.5
-2.7
-3.7
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