Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2577 and Atu2578 are separated by 43 nucleotidesAtu2578 and Atu2579 are separated by 191 nucleotidesAtu2579 and Atu2580 are separated by 267 nucleotidesAtu2580 and Atu8180 are separated by 37 nucleotides Atu2577: Atu2577 - ABC transporter, nucleotide binding/ATPase protein, at 2,550,040 to 2,552,757 Atu2577 Atu2578: Atu2578 - cAMP-dependent protein kinase regulatory subunit, at 2,552,801 to 2,553,256 Atu2578 Atu2579: Atu2579 - metal dependant beta lactamase protein, at 2,553,448 to 2,554,308 Atu2579 Atu2580: Atu2580 - adenylate cyclase, at 2,554,576 to 2,556,270 Atu2580 Atu8180: Atu8180 - hypothetical protein, at 2,556,308 to 2,556,790 Atu8180
Group Condition Atu2577 Atu2578 Atu2579 Atu2580 Atu8180
stress R2A with Nitrofurantoin 0.4 mg/mL -5.1 +0.7 +0.2 -0.0 -2.7
stress R2A with hypochlorite 6.25 mM -4.4 -0.5 -0.3 +0.3 -1.5
stress R2A with Nitrofurantoin 0.4 mg/mL -4.5 +0.7 +0.4 +0.1 -3.1
stress Pyrogallol 0.5 mM -4.9 +0.3 +0.0 -0.0 -1.2
stress R2A with hypochlorite 6.25 mM -3.4 -0.5 -0.2 -0.0 -1.1
stress R2A with Carbenicillin 150 mM -3.7 -0.2 +0.1 +0.0 -1.1
stress Pyrogallol 0.5 mM -4.0 +0.1 +0.3 -0.2 -1.0
stress Indole-3-butyric 5 mM -4.0 -0.0 +0.2 +0.1 -0.7
stress R2A with Nalidixic 0.02 mM -3.4 +0.2 +0.5 +0.0 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -3.2 -1.2 +0.2 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -2.3 -1.8 +0.0 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -3.0 -0.9 -0.2 +0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -2.4 -1.5 +0.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -2.6 -1.1 +0.1 +0.9
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -2.1 -1.9 +0.2 +1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -2.2 -1.2 -0.0 +1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -1.9 -1.3 +0.6 +0.7
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -2.8 +1.7 +2.1 +0.1 -2.3
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -2.8 +1.9 +1.9 -0.1 -1.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 -2.2 -0.8 +0.1 +1.0
stress R2A with Bacitracin 0.6 mM -1.9 +1.8 +1.1 -0.0 -1.1
stress R2A with Bacitracin 0.6 mM -1.6 +1.7 +0.9 +0.1 -0.9
stress R2A with Vancomycin 0.009 mM -1.3 +1.0 +2.0 +0.1 -1.2
stress R2A with Vancomycin 0.009 mM -1.5 +1.2 +1.8 +0.2 -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.6 -1.3 -1.2 +0.6 +0.9
stress R2A with Ceftazidime 4 mM -1.0 +1.9 +1.3 -0.1 -1.0
stress R2A with Ticarcillin 0.01 mM -0.9 +2.0 +2.3 -0.0 -0.6
stress R2A with Ticarcillin 0.01 mM -0.8 +2.0 +2.2 +0.0 -0.5
stress R2A with Tetracycline 0.002 mM -3.6 +5.2 +4.9 -0.1 -3.1
stress R2A with Tetracycline 0.002 mM -3.0 +5.5 +4.8 +0.2 -2.4
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