Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2576 and Atu2577 are separated by 304 nucleotidesAtu2577 and Atu2578 are separated by 43 nucleotidesAtu2578 and Atu2579 are separated by 191 nucleotidesAtu2579 and Atu2580 are separated by 267 nucleotides Atu2576: Atu2576 - hypothetical protein, at 2,547,876 to 2,549,735 Atu2576 Atu2577: Atu2577 - ABC transporter, nucleotide binding/ATPase protein, at 2,550,040 to 2,552,757 Atu2577 Atu2578: Atu2578 - cAMP-dependent protein kinase regulatory subunit, at 2,552,801 to 2,553,256 Atu2578 Atu2579: Atu2579 - metal dependant beta lactamase protein, at 2,553,448 to 2,554,308 Atu2579 Atu2580: Atu2580 - adenylate cyclase, at 2,554,576 to 2,556,270 Atu2580
Group Condition Atu2576 Atu2577 Atu2578 Atu2579 Atu2580
stress R2A with hypochlorite 6.25 mM +0.2 -4.4 -0.5 -0.3 +0.3
stress Pyrogallol 0.5 mM +0.0 -4.9 +0.3 +0.0 -0.0
stress R2A with Nitrofurantoin 0.4 mg/mL -0.0 -5.1 +0.7 +0.2 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -3.0 -0.7 -0.6 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 -3.1 -1.2 +0.0
stress Indole-3-butyric 5 mM +0.1 -4.0 -0.0 +0.2 +0.1
stress Pyrogallol 0.5 mM +0.1 -4.0 +0.1 +0.3 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.4 -3.0 -0.9 -0.2
stress R2A with Nitrofurantoin 0.4 mg/mL -0.1 -4.5 +0.7 +0.4 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 -2.3 -1.8 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.5 -3.2 -1.2 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 -2.1 -1.9 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.8 -2.4 -1.5 +0.1
carbon source Stachyose (C) +0.1 +0.7 -3.1 -0.4 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.8 -2.6 -1.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 -1.9 -1.3 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +1.3 -2.2 -0.8 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +1.6 -1.3 -1.2 +0.6
stress R2A with Bacitracin 0.6 mM -0.2 -1.9 +1.8 +1.1 -0.0
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.0 -2.8 +1.9 +1.9 -0.1
stress R2A with Bacitracin 0.6 mM +0.0 -1.6 +1.7 +0.9 +0.1
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.0 -2.8 +1.7 +2.1 +0.1
stress R2A with Vancomycin 0.009 mM +0.0 -1.5 +1.2 +1.8 +0.2
stress R2A with Vancomycin 0.009 mM +0.2 -1.3 +1.0 +2.0 +0.1
stress R2A with Ceftazidime 4 mM -0.1 -1.0 +1.9 +1.3 -0.1
stress R2A with Ceftazidime 4 mM +0.1 -1.0 +1.9 +1.6 +0.1
stress R2A with Ticarcillin 0.01 mM -0.1 -0.9 +2.0 +2.3 -0.0
stress R2A with Ticarcillin 0.01 mM +0.2 -0.8 +2.0 +2.2 +0.0
stress R2A with Tetracycline 0.002 mM +0.3 -3.6 +5.2 +4.9 -0.1
stress R2A with Tetracycline 0.002 mM +0.0 -3.0 +5.5 +4.8 +0.2
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