Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2573 and Atu2574 are separated by 342 nucleotidesAtu2574 and Atu2575 overlap by 4 nucleotidesAtu2575 and Atu2576 overlap by 33 nucleotidesAtu2576 and Atu2577 are separated by 304 nucleotides Atu2573: Atu2573 - hypothetical protein, at 2,543,770 to 2,544,465 Atu2573 Atu2574: Atu2574 - hypothetical protein, at 2,544,808 to 2,545,455 Atu2574 Atu2575: Atu2575 - mannosidase, at 2,545,452 to 2,547,908 Atu2575 Atu2576: Atu2576 - hypothetical protein, at 2,547,876 to 2,549,735 Atu2576 Atu2577: Atu2577 - ABC transporter, nucleotide binding/ATPase protein, at 2,550,040 to 2,552,757 Atu2577
Group Condition Atu2573 Atu2574 Atu2575 Atu2576 Atu2577
stress R2A with Nitrofurantoin 0.4 mg/mL +0.2 +0.1 +0.0 -0.0 -5.1
stress Pyrogallol 0.5 mM +0.5 -0.1 +0.0 +0.0 -4.9
stress Indole-3-butyric 5 mM -0.3 -0.1 -0.0 +0.1 -4.0
stress R2A with Nitrofurantoin 0.4 mg/mL +0.4 +0.1 -0.0 -0.1 -4.5
stress Indole-3-butyric 5 mM -0.2 -0.0 +0.0 +0.0 -4.0
stress R2A with hypochlorite 6.25 mM -0.3 +0.3 +0.1 +0.2 -4.4
stress Dodecyl Sulfate 0.2 mM +0.0 +0.0 -0.0 -0.0 -4.0
stress Pyrogallol 0.5 mM +0.0 +0.3 +0.0 +0.1 -4.0
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.1 -0.4 -0.1 -0.0 -2.8
stress R2A with Tetracycline 0.002 mM -0.6 +0.2 -0.0 +0.0 -3.0
stress R2A with Nalidixic 0.02 mM -0.0 +0.1 -0.0 -0.0 -3.4
stress D(+)-Carvone 5 mM -0.0 -0.1 -0.1 -0.0 -3.1
lb_arabidopsis_leaf LB_arabidopsis_leaf -0.2 -0.3 +0.0 +0.1 -2.8
stress R2A with Tetracycline 0.002 mM +0.0 +0.2 +0.0 +0.3 -3.6
stress R2A with Carbenicillin 150 mM +0.5 -0.0 +0.0 +0.1 -3.7
stress R2A with Nalidixic 0.02 mM +0.0 +0.1 +0.1 +0.1 -3.4
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.1 -0.0 -0.0 -0.0 -2.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.0 -0.0 +0.2 -3.4
stress D(+)-Carvone 5 mM +0.0 +0.1 -0.1 -0.1 -3.0
stress R2A with hypochlorite 6.25 mM +0.3 +0.2 +0.0 +0.0 -3.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 -0.0 +0.1 -3.0
stress Dodecyl Sulfate 0.2 mM -0.0 +0.1 -0.0 +0.1 -2.9
stress Cinnamic 1.25 mM -0.2 +0.2 +0.0 +0.1 -2.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.1 +0.2 +0.1 -2.8
stress methyl jasmonate 5 mM +0.0 +0.2 -0.0 +0.0 -2.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.1 -0.1 -0.0 -2.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.4 -0.2 +0.1 -2.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.1 -0.3 -0.6 +1.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.7 +0.5 +0.6 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.3 -0.3 +0.3 +0.4 +0.1
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