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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu2573 and Atu2574 are separated by 342 nucleotides
Atu2574 and Atu2575 overlap by 4 nucleotides
Atu2575 and Atu2576 overlap by 33 nucleotides
Atu2576 and Atu2577 are separated by 304 nucleotides
Atu2573: Atu2573 - hypothetical protein, at 2,543,770 to 2,544,465
Atu2573
Atu2574: Atu2574 - hypothetical protein, at 2,544,808 to 2,545,455
Atu2574
Atu2575: Atu2575 - mannosidase, at 2,545,452 to 2,547,908
Atu2575
Atu2576: Atu2576 - hypothetical protein, at 2,547,876 to 2,549,735
Atu2576
Atu2577: Atu2577 - ABC transporter, nucleotide binding/ATPase protein, at 2,550,040 to 2,552,757
Atu2577
Group
Condition
Atu2573
Atu2574
Atu2575
Atu2576
Atu2577
stress
R2A with Nitrofurantoin 0.4 mg/mL
+0.2
+0.1
+0.0
-0.0
-5.1
stress
Pyrogallol 0.5 mM
+0.5
-0.1
+0.0
+0.0
-4.9
stress
Indole-3-butyric 5 mM
-0.3
-0.1
-0.0
+0.1
-4.0
stress
R2A with Nitrofurantoin 0.4 mg/mL
+0.4
+0.1
-0.0
-0.1
-4.5
stress
Indole-3-butyric 5 mM
-0.2
-0.0
+0.0
+0.0
-4.0
stress
R2A with hypochlorite 6.25 mM
-0.3
+0.3
+0.1
+0.2
-4.4
stress
Dodecyl Sulfate 0.2 mM
+0.0
+0.0
-0.0
-0.0
-4.0
stress
Pyrogallol 0.5 mM
+0.0
+0.3
+0.0
+0.1
-4.0
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
-0.1
-0.4
-0.1
-0.0
-2.8
stress
R2A with Tetracycline 0.002 mM
-0.6
+0.2
-0.0
+0.0
-3.0
stress
R2A with Nalidixic 0.02 mM
-0.0
+0.1
-0.0
-0.0
-3.4
stress
D(+)-Carvone 5 mM
-0.0
-0.1
-0.1
-0.0
-3.1
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-0.2
-0.3
+0.0
+0.1
-2.8
stress
R2A with Tetracycline 0.002 mM
+0.0
+0.2
+0.0
+0.3
-3.6
stress
R2A with Carbenicillin 150 mM
+0.5
-0.0
+0.0
+0.1
-3.7
stress
R2A with Nalidixic 0.02 mM
+0.0
+0.1
+0.1
+0.1
-3.4
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
-0.1
-0.0
-0.0
-0.0
-2.8
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
+0.0
-0.0
+0.2
-3.4
stress
D(+)-Carvone 5 mM
+0.0
+0.1
-0.1
-0.1
-3.0
stress
R2A with hypochlorite 6.25 mM
+0.3
+0.2
+0.0
+0.0
-3.4
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
-0.2
-0.0
+0.1
-3.0
stress
Dodecyl Sulfate 0.2 mM
-0.0
+0.1
-0.0
+0.1
-2.9
stress
Cinnamic 1.25 mM
-0.2
+0.2
+0.0
+0.1
-2.8
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
+0.1
+0.2
+0.1
-2.8
stress
methyl jasmonate 5 mM
+0.0
+0.2
-0.0
+0.0
-2.7
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
+0.1
-0.1
-0.0
-2.6
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.4
+0.4
-0.2
+0.1
-2.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.4
+0.1
-0.3
-0.6
+1.6
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.7
+0.7
+0.5
+0.6
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
+2.3
-0.3
+0.3
+0.4
+0.1
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