Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2558 and Atu2559 are separated by 102 nucleotidesAtu2559 and Atu2560 are separated by 130 nucleotidesAtu2560 and Atu2561 are separated by 233 nucleotidesAtu2561 and Atu2562 are separated by 53 nucleotides Atu2558: Atu2558 - transcriptional regulator, Lrp family, at 2,530,960 to 2,531,196 Atu2558 Atu2559: Atu2559 - transcriptional regulator, LysR family, at 2,531,299 to 2,532,225 Atu2559 Atu2560: Atu2560 - oxidoreductase, at 2,532,356 to 2,533,639 Atu2560 Atu2561: Atu2561 - ABC transporter, substrate binding protein (molybdate), at 2,533,873 to 2,534,664 Atu2561 Atu2562: Atu2562 - ABC transporter, membrane spanning protein (molybdate), at 2,534,718 to 2,535,425 Atu2562
Group Condition Atu2558 Atu2559 Atu2560 Atu2561 Atu2562
nitrogen source L-Pipecolic Acid (N) N.D. -1.6 -2.5 -0.4 +0.0
nitrogen source L-Pipecolic Acid (N) N.D. -1.6 -2.5 -0.3 -0.0
stress R2A with hypochlorite 6.25 mM N.D. +0.2 -0.0 -1.7 -1.2
stress R2A with hypochlorite 6.25 mM N.D. -0.1 -0.0 -0.6 -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 -0.0 -0.8 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -0.5 +0.0 -0.5 -0.4
phage AgroPhage_H04 N.D. -0.5 -0.1 -0.2 -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.1 +0.0 -0.5 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 -0.2 -0.0 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.3 -0.8 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.7 -0.4 +0.2 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.2 -1.1 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.4 -0.2 -0.3 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.3 -0.7 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 -0.1 +0.4 -0.4
nitrogen source DL-2-Aminobutyric (N) N.D. -0.4 +0.5 -0.8 +0.4
stress R2A with Gallium(III) chloride 0.02 mM N.D. +0.1 -0.1 -0.5 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.3 +0.1 -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.4 -0.0 -0.4 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.4 -0.2 -0.5 +0.1
carbon source D-Saccharic potassium salt (C) N.D. -0.1 -0.3 +0.5 -0.3
r2a_control R2A control N.D. +0.3 -0.2 -0.3 +0.2
phage AgroPhage_E04 N.D. -0.6 +0.0 +0.5 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +0.5 +0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.0 -0.2 +0.7 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 +0.1 +0.4 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +0.7 +0.5 +0.2
stress R2A with bromate 5 mM N.D. -0.2 -0.1 +0.7 +1.2
stress R2A with bromate 5 mM N.D. +0.0 +0.0 +1.0 +1.0
stress R2A with Chlorate 400 mM N.D. -0.0 -0.0 +1.6 +1.8
remove
Atu2558
plot		 remove
Atu2559
plot		 remove
Atu2560		 remove
Atu2561
plot		 remove
Atu2562
plot