Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2526 and Atu2527 overlap by 4 nucleotidesAtu2527 and Atu2528 are separated by 12 nucleotidesAtu2528 and Atu2529 are separated by 3 nucleotidesAtu2529 and Atu2530 are separated by 46 nucleotides Atu2526: Atu2526 - hypothetical protein, at 2,499,868 to 2,500,206 Atu2526 Atu2527: Atu2527 - dioxygenase, at 2,500,203 to 2,501,090 Atu2527 Atu2528: Atu2528 - maleylacetate reductase, at 2,501,103 to 2,502,158 Atu2528 Atu2529: Atu2529 - hypothetical protein, at 2,502,162 to 2,503,145 Atu2529 Atu2530: Atu2530 - oxidoreductase, at 2,503,192 to 2,504,421 Atu2530
Group Condition Atu2526 Atu2527 Atu2528 Atu2529 Atu2530
carbon source 2-6-dihydroxybenzoic (C) -0.1 -1.3 -1.5 -1.9 -0.9
carbon source 2-6-dihydroxybenzoic (C) -0.9 -1.0 -1.3 -1.4 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 -0.2 -0.2 -0.4 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.2 +0.0 -0.4 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.2 -0.2 -0.3 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.1 -0.2 -0.2 +0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.1 +0.0 +0.1 -0.1 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.4 -0.1 +0.2 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.2 -0.1 +0.2 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.3 -0.0 +0.0 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 +0.0 -0.5 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 +0.0 +0.3 -0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.3 -0.1 +0.1 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.3 -0.0 -0.3 -0.2
phage AgroPhage_F10 -0.2 +0.0 -0.2 +0.4 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.0 -0.6 +0.1 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 -0.2 +0.5 +0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.1 +0.5 -0.2 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.1 -0.3 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.0 +0.2 -0.4 +0.1
phage AgroPhage_E10 +0.3 -0.2 -0.1 +0.9 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.1 -0.1 -0.3 -0.2 +0.0
carbon source D-Saccharic potassium salt (C) +0.4 +0.1 +0.1 +0.4 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.0 +0.0 +0.0 -0.1 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.5 -0.0 +0.0 +0.4
carbon source L-Fucose (C) +0.5 +0.1 +0.2 +0.2 -0.2
nitrogen source D-Lysine (N) +0.8 +0.1 -0.1 +0.1 +0.1
stress R2A with Vancomycin 0.009 mM +0.5 +0.3 +0.3 +0.1 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 +0.5 +0.3 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +2.1 -0.1 -0.2 +0.3 +0.2
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