Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2514 and Atu2515 overlap by 4 nucleotidesAtu2515 and Atu2516 are separated by 3 nucleotidesAtu2516 and Atu2517 overlap by 4 nucleotidesAtu2517 and Atu2518 overlap by 4 nucleotides Atu2514: Atu2514 - ABC transporter, nucleotide binding/ATPase protein (dipeptide), at 2,483,060 to 2,483,800 Atu2514 Atu2515: Atu2515 - ABC transporter, nucleotide binding/ATPase protein (dipeptide), at 2,483,797 to 2,484,627 Atu2515 Atu2516: Atu2516 - ABC transporter, membrane spanning protein (dipeptide), at 2,484,631 to 2,485,533 Atu2516 Atu2517: Atu2517 - ABC transporter, membrane spanning protein (dipeptide), at 2,485,530 to 2,486,549 Atu2517 Atu2518: Atu2518 - ABC transporter, substrate binding protein (dipeptide), at 2,486,546 to 2,488,141 Atu2518
Group Condition Atu2514 Atu2515 Atu2516 Atu2517 Atu2518
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 -0.4 -0.1 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.0 -1.1 -0.3 -0.3 +0.0
lb_tobacco_leaf LB_Tobacco_Leaf -0.2 -0.8 -0.1 -0.4 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.4 -0.6 -0.3 -0.2 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.0 -0.8 -0.3 -0.3 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.5 -0.2 -0.5 -0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.3 -0.2 -0.3 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.8 -0.2 -0.1 -0.0
lb_benthi_root LB_Benthi_root -0.2 -0.6 -0.1 -0.3 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.5 +0.2 +0.0 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.2 -0.3 -0.1 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 -0.1 -0.5 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.4 +0.4 -0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.7 +0.2 +0.1 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 -0.0 -0.5 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.8 +0.2 +0.0 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.8 -0.0 -0.1 +0.1
lb LB +0.3 -0.5 +0.3 -0.4 -0.0
nitrogen source DL-2-Aminobutyric (N) +0.2 -0.2 -0.6 +0.5 +0.0
phage AgroPhage_E10 +0.5 -0.5 -0.4 +0.2 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.3 +0.6 -0.2 +0.2
phage AgroPhage_B07 +0.4 -0.4 +0.2 -0.1 +0.3
phage AgroPhage_E04 +0.7 +0.1 -0.5 +0.1 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.4 +0.4 +0.0 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 +0.4 -0.2 +0.5
phage Phage 95.3 + bacteria +0.2 +1.0 -0.3 +0.1 +0.1
carbon source D-Saccharic potassium salt (C) +0.6 -0.1 +0.2 +0.1 +0.5
carbon source Ethyl benzoate (C) +0.2 +0.4 +0.2 +0.2 +0.2
phage Phage 95.3 + bacteria +0.2 +1.1 +0.1 +0.1 -0.0
phage AgroPhage_C04 +0.5 +1.3 +0.6 +0.0 +0.0
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