Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2507 and Atu2508 are separated by 103 nucleotidesAtu2508 and Atu2509 are separated by 20 nucleotidesAtu2509 and Atu2510 are separated by 143 nucleotidesAtu2510 and Atu2511 are separated by 19 nucleotides Atu2507: Atu2507 - ABC transporter, membrane spanning protein (sugar), at 2,475,317 to 2,476,153 Atu2507 Atu2508: Atu2508 - ABC transporter, nucleotide binding/ATPase protein (sugar), at 2,476,257 to 2,477,315 Atu2508 Atu2509: Atu2509 - sugar kinase, at 2,477,336 to 2,478,295 Atu2509 Atu2510: Atu2510 - aminopeptidase, at 2,478,439 to 2,479,497 Atu2510 Atu2511: Atu2511 - D-alanine aminotransferase, at 2,479,517 to 2,480,383 Atu2511
Group Condition Atu2507 Atu2508 Atu2509 Atu2510 Atu2511
carbon source D-Saccharic potassium salt (C) +0.1 -0.2 -0.5 -0.2 -1.7
stress R2A with Vancomycin 0.009 mM +0.4 +0.1 +0.4 -0.7 -2.7
stress R2A with Vancomycin 0.009 mM +0.1 +0.0 -0.2 -0.4 -1.8
carbon source D-Saccharic potassium salt (C) +0.1 -0.4 +0.1 -0.2 -1.3
stress R2A with m-arsenite 0.8 mM -0.1 -0.2 -0.0 -0.2 -1.1
stress R2A with Magnesium sulfate 400 mM -0.1 +0.1 +0.1 -0.6 -0.9
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.6 -0.8 -0.2
carbon source NAG (C) -0.1 -0.0 -0.0 -0.2 -1.2
carbon source Ethyl benzoate (C) -0.2 -0.0 -0.2 -0.4 -0.7
carbon source NAG (C) -0.1 -0.1 +0.1 -0.3 -1.0
carbon source methyl-alpha-D-xylopyranoside (C) -0.1 -0.2 -0.1 +0.0 -1.0
stress R2A with m-arsenite 0.8 mM +0.0 -0.1 -0.1 -0.4 -0.9
phage AgroPhage_E04 +0.1 -0.2 -0.3 -0.4 -0.6
carbon source Cellopentaose (C) -0.5 +0.0 +0.1 -0.3 -0.6
phage AgroPhage_H03 -0.4 +0.1 -0.4 -0.3 -0.2
carbon source Cellopentaose (C) +0.2 -0.1 -0.1 -0.4 -0.8
stress R2A with Gentamicin 0.00125 mM -0.2 -0.0 +0.2 -0.5 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.0 +0.2 -0.1 -0.9
carbon source Cellohexaose (C) +0.1 -0.0 +0.3 -0.3 -0.8
carbon source L-ascorbate (C) +0.3 +0.3 -0.1 -0.2 -0.8
phage AgroPhage_F03 +0.1 +0.3 -0.0 -0.4 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.0 +0.2 +0.3 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 +0.0 +0.4 -0.4
carbon source L-ascorbate (C) +0.5 +0.2 +0.1 -0.3 -0.9
nitrogen source DL-2-Aminobutyric (N) -0.2 -0.3 +0.3 +0.6 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 -0.2 -0.0 -0.2 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.1 +0.3 +0.5
stress R2A with Chloride 800 mM -0.2 +0.1 -0.0 +0.2 +1.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 +0.4 +0.1 +0.8
stress R2A with Chloride 800 mM +0.1 -0.1 +0.0 +0.3 +1.2
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