Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2503 and Atu2504 are separated by 20 nucleotidesAtu2504 and Atu2505 are separated by 102 nucleotidesAtu2505 and Atu2506 overlap by 1 nucleotidesAtu2506 and Atu2507 overlap by 1 nucleotides Atu2503: Atu2503 - dihydrodipicolinate synthase, at 2,471,384 to 2,472,268 Atu2503 Atu2504: Atu2504 - transcriptional regulator, GntR family, at 2,472,289 to 2,472,945 Atu2504 Atu2505: Atu2505 - ABC transporter, substrate binding protein (sugar), at 2,473,048 to 2,474,379 Atu2505 Atu2506: Atu2506 - ABC transporter, membrane spanning protein (sugar), at 2,474,379 to 2,475,317 Atu2506 Atu2507: Atu2507 - ABC transporter, membrane spanning protein (sugar), at 2,475,317 to 2,476,153 Atu2507
Group Condition Atu2503 Atu2504 Atu2505 Atu2506 Atu2507
stress R2A with Vancomycin 0.009 mM -0.2 -3.4 -0.0 +0.1 +0.1
stress R2A with Vancomycin 0.009 mM +0.1 -3.5 -0.1 -0.0 +0.4
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.0 -1.7 +0.0 -0.1 +0.0
stress R2A with Rifampicin 0.0007 mM +0.1 -1.9 +0.1 -0.1 +0.3
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.1 -1.3 -0.2 +0.0 +0.2
stress R2A with EDTA 0.25 mM -0.1 -1.5 -0.0 -0.1 +0.3
stress R2A with bromate 5 mM +0.1 -1.2 -0.0 -0.1 -0.2
stress R2A with Phenazine methosulfate 0.05 mM +0.1 -0.7 -0.2 -0.1 -0.3
stress R2A with bromate 5 mM +0.1 -1.1 +0.0 -0.1 +0.0
carbon source L-Fucose (C) +0.0 -1.2 +0.1 +0.1 -0.1
stress R2A with sodium iodate 30 mM +0.0 -0.9 +0.2 -0.1 -0.2
carbon source L-Fucose (C) +0.3 -1.3 +0.2 -0.0 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 +0.1 +0.2 -0.0
stress R2A with Ceftazidime 4 mM +0.0 -0.9 +0.3 -0.1 -0.1
phage AgroPhage_E10 -0.5 +0.2 -0.5 +0.2 -0.2
stress R2A with Rifampicin 0.0007 mM +0.1 -1.0 +0.2 -0.0 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 -0.3 -0.2 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.2 +0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.6 -0.1 +0.2 +0.4
phage AgroPhage_C04 -0.2 -0.7 +0.2 -0.1 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.6 -0.1 +0.1 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.3 +0.1 -0.0 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.2 +0.4 +0.2 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.5 -0.1 +0.3 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 +0.1 -0.0 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.5 +0.1 +0.1 +0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.3 +0.6 +0.1 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.7 +0.8 -0.0 -0.2
carbon source L-ascorbate (C) +0.5 -0.1 +0.4 +0.3 +0.5
carbon source L-ascorbate (C) +0.5 -0.1 +0.4 +0.4 +0.3
remove
Atu2503
plot		 remove
Atu2504
plot		 remove
Atu2505		 remove
Atu2506
plot		 remove
Atu2507
plot