Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2493 and Atu2494 are separated by 20 nucleotidesAtu2494 and Atu2495 are separated by 206 nucleotidesAtu2495 and Atu2496 are separated by 41 nucleotidesAtu2496 and Atu2497 are separated by 20 nucleotides Atu2493: Atu2493 - NAD(P)+ transhydrogenase, at 2,462,596 to 2,464,170 Atu2493 Atu2494: Atu2494 - NAD(P)+ transhydrogenase beta chain, at 2,464,191 to 2,465,636 Atu2494 Atu2495: Atu2495 - flavoprotein oxidoreductase, at 2,465,843 to 2,466,367 Atu2495 Atu2496: Atu2496 - nitroreducatase, at 2,466,409 to 2,466,999 Atu2496 Atu2497: Atu2497 - hydrolase, at 2,467,020 to 2,467,805 Atu2497
Group Condition Atu2493 Atu2494 Atu2495 Atu2496 Atu2497
nitrogen source Orotic (N) -0.1 +0.1 -2.3 -2.0 -2.0
nitrogen source Orotic (N) -0.0 -0.1 -1.7 -2.2 -2.1
carbon source DL-glyceraldehyde (C) -2.3 -2.6 +0.2 +0.1 -0.0
carbon source DL-glyceraldehyde (C) -2.2 -2.0 -0.1 +0.2 -0.0
carbon source m-Inositol (C) -1.8 -1.9 -0.2 -0.1 +0.1
carbon source L-Sorbose (C) +0.1 +0.0 -3.3 -0.2 -0.4
carbon source 4-Hydroxybenzoic Acid (C) -1.9 -1.6 -0.2 -0.1 +0.1
carbon source m-Inositol (C) -1.8 -1.8 -0.1 +0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -1.7 -1.5 -0.3 +0.2 -0.1
carbon source L-Sorbose (C) +0.0 -0.0 -3.1 -0.1 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -1.6 -1.4 -0.6 +0.5 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -1.4 -1.7 -0.1 +0.2 +0.1
carbon source pyruvate (C) -1.0 -1.0 -0.6 -0.1 +0.0
carbon source p-Coumaric (C) -0.9 -0.7 -0.8 +0.1 -0.1
carbon source pyruvate (C) -1.0 -1.1 -0.4 +0.2 -0.2
carbon source L-Galactose (C) -0.9 -0.9 -0.3 -0.1 -0.1
carbon source Phloretic Acid (C) -0.4 -0.3 -1.3 -0.2 -0.1
carbon source L-Alanine (C) -0.8 -0.9 -0.3 -0.2 -0.1
carbon source L-Galactose (C) -0.9 -0.9 -0.4 +0.2 -0.1
carbon source p-Coumaric (C) -0.8 -0.8 -0.5 +0.0 +0.0
carbon source Ferulic Acid (C) -0.6 -0.5 -0.5 +0.0 -0.1
carbon source L-Alanine (C) -0.7 -0.8 -0.2 -0.1 +0.1
carbon source Glycerol (C) -0.5 -0.6 -0.6 -0.0 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 -0.2 -0.4 -0.4
nitrogen source DL-2-Aminobutyric (N) +0.2 -0.0 -0.0 +0.4 -1.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.1 -1.1 +0.4 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -0.3 -0.3 +0.8 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.5 -1.0 -0.0 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.0 +0.8 +0.5 -0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 +1.0 +0.3 +0.1
remove
Atu2493
plot		 remove
Atu2494
plot		 remove
Atu2495		 remove
Atu2496
plot		 remove
Atu2497
plot