Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2491 and Atu2492 are separated by 162 nucleotidesAtu2492 and Atu2493 are separated by 189 nucleotidesAtu2493 and Atu2494 are separated by 20 nucleotidesAtu2494 and Atu2495 are separated by 206 nucleotides Atu2491: Atu2491 - hypothetical protein, at 2,460,016 to 2,460,399 Atu2491 Atu2492: Atu2492 - MFS permease, at 2,460,562 to 2,462,406 Atu2492 Atu2493: Atu2493 - NAD(P)+ transhydrogenase, at 2,462,596 to 2,464,170 Atu2493 Atu2494: Atu2494 - NAD(P)+ transhydrogenase beta chain, at 2,464,191 to 2,465,636 Atu2494 Atu2495: Atu2495 - flavoprotein oxidoreductase, at 2,465,843 to 2,466,367 Atu2495
Group Condition Atu2491 Atu2492 Atu2493 Atu2494 Atu2495
carbon source DL-glyceraldehyde (C) -0.3 -0.0 -2.3 -2.6 +0.2
carbon source DL-glyceraldehyde (C) -0.3 -0.1 -2.2 -2.0 -0.1
carbon source pyruvate (C) -0.5 -1.3 -1.0 -1.0 -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.8 -0.0 -1.7 -1.5 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -0.0 -1.9 -1.6 -0.2
carbon source m-Inositol (C) -0.4 -0.1 -1.8 -1.8 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.6 +0.1 -1.6 -1.4 -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.8 +0.1 -1.4 -1.7 -0.1
carbon source m-Inositol (C) -0.1 +0.0 -1.8 -1.9 -0.2
carbon source pyruvate (C) -0.3 -1.1 -1.0 -1.1 -0.4
carbon source L-Sorbose (C) +0.2 -0.2 +0.1 +0.0 -3.3
carbon source L-Sorbose (C) +0.1 -0.1 +0.0 -0.0 -3.1
carbon source L-Galactose (C) -0.6 -0.2 -0.9 -0.9 -0.3
carbon source L-Alanine (C) -0.4 -0.6 -0.7 -0.8 -0.2
carbon source L-Galactose (C) -0.4 -0.0 -0.9 -0.9 -0.4
carbon source L-Alanine (C) +0.1 -0.7 -0.8 -0.9 -0.3
carbon source p-Coumaric (C) +0.0 +0.1 -0.9 -0.7 -0.8
nitrogen source Orotic (N) -0.1 +0.1 -0.1 +0.1 -2.3
carbon source Glycerol (C) -0.1 -0.2 -0.5 -0.6 -0.6
carbon source p-Coumaric (C) -0.2 +0.2 -0.8 -0.8 -0.5
phage AgroPhage_C04 -1.2 -0.0 +0.1 -0.4 -0.4
carbon source Phloretic Acid (C) -0.3 +0.4 -0.4 -0.3 -1.3
carbon source Fumarate (C) -1.1 +0.1 -0.3 -0.4 -0.1
carbon source Ferulic Acid (C) +0.2 -0.1 -0.6 -0.5 -0.5
carbon source Phloretic Acid (C) -0.3 +0.4 -0.2 -0.2 -1.3
nitrogen source Orotic (N) +0.4 -0.0 -0.0 -0.1 -1.7
carbon source Ferulic Acid (C) +0.4 -0.1 -0.4 -0.6 -0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 +0.5 +0.5 -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 -0.1 +0.5 +0.1 -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5 +0.1 -0.2 +0.2 -0.0
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