Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2481 and Atu2482 are separated by 56 nucleotidesAtu2482 and Atu2483 are separated by 131 nucleotidesAtu2483 and Atu2484 are separated by 291 nucleotidesAtu2484 and Atu2485 are separated by 33 nucleotides Atu2481: Atu2481 - lipase esterase, at 2,447,755 to 2,448,561 Atu2481 Atu2482: Atu2482 - HlyD family secretion protein, at 2,448,618 to 2,449,808 Atu2482 Atu2483: Atu2483 - AcrB/AcrD/AcrF family protein, at 2,449,940 to 2,453,134 Atu2483 Atu2484: Atu2484 - hypothetical protein, at 2,453,426 to 2,453,620 Atu2484 Atu2485: Atu2485 - hypothetical protein, at 2,453,654 to 2,454,499 Atu2485
Group Condition Atu2481 Atu2482 Atu2483 Atu2484 Atu2485
lb_arabidopsis_leaf LB_arabidopsis_leaf -2.4 -2.6 -2.5 -0.0 +0.0
stress R2A with Nitrofurantoin 0.4 mg/mL -0.2 -3.4 -3.0 +0.0 -0.1
stress R2A with Nitrofurantoin 0.4 mg/mL -0.4 -2.9 -3.0 -0.2 +0.0
lb_arabidopsis_leaf LB_arabidopsis_leaf -1.1 -1.3 -1.6 -0.2 -0.0
stress R2A with Nalidixic 0.02 mM +0.8 -2.3 -2.1 -0.4 -0.1
phage AgroPhage_F04 -0.2 +0.1 -0.1 -3.0 -0.0
stress R2A with Nalidixic 0.02 mM +1.1 -2.2 -2.3 +0.5 -0.1
carbon source D-Saccharic potassium salt (C) +0.2 -0.1 -0.1 -1.9 -0.8
lb_arabidopsis_leaf LB_arabidopsis_leaf -0.4 -0.8 -0.7 -0.6 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.1 -2.5 -0.1
phage AgroPhage_C10 +0.0 -0.1 +0.1 -2.7 +0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.7 -0.7 -0.9 +0.0 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.2 +0.4 -1.8 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -0.1 -2.1 -0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.0 -0.0 -1.5 -0.6
Atjh15 -0.4 +0.1 +0.2 -2.3 +0.3
in planta Bethi_Library_OD0.05 -0.2 +0.0 -0.1 -2.2 +0.4
stress R2A with hypochlorite 6.25 mM -0.5 -0.5 -0.4 -0.7 +0.2
lb_arabidopsis_leaf LB_arabidopsis_leaf -0.6 -0.8 -0.9 +0.6 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.2 -1.8 -0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.2 -1.6 -0.7
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 +0.2 -1.4 -0.5
stress R2A with Tetracycline 0.002 mM +0.5 +0.3 +0.2 -2.0 -0.2
stress R2A with Bacitracin 0.6 mM +0.9 -0.9 -0.7 +0.2 -0.1
stress R2A with Bacitracin 0.6 mM +1.0 -1.2 -0.9 +0.6 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.2 -1.5 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.3 -0.7 -0.7
nitrogen source DL-2-Aminobutyric (N) -0.5 +0.2 +0.1 +0.3 +1.8
stress R2A with m-arsenite 0.8 mM +2.0 +1.8 +1.0 -0.8 -0.1
stress R2A with m-arsenite 0.8 mM +2.4 +2.4 +1.5 -0.1 -0.0
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