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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu2481 and Atu2482 are separated by 56 nucleotides
Atu2482 and Atu2483 are separated by 131 nucleotides
Atu2483 and Atu2484 are separated by 291 nucleotides
Atu2484 and Atu2485 are separated by 33 nucleotides
Atu2481: Atu2481 - lipase esterase, at 2,447,755 to 2,448,561
Atu2481
Atu2482: Atu2482 - HlyD family secretion protein, at 2,448,618 to 2,449,808
Atu2482
Atu2483: Atu2483 - AcrB/AcrD/AcrF family protein, at 2,449,940 to 2,453,134
Atu2483
Atu2484: Atu2484 - hypothetical protein, at 2,453,426 to 2,453,620
Atu2484
Atu2485: Atu2485 - hypothetical protein, at 2,453,654 to 2,454,499
Atu2485
Group
Condition
Atu2481
Atu2482
Atu2483
Atu2484
Atu2485
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-2.4
-2.6
-2.5
-0.0
+0.0
stress
R2A with Nitrofurantoin 0.4 mg/mL
-0.2
-3.4
-3.0
+0.0
-0.1
stress
R2A with Nitrofurantoin 0.4 mg/mL
-0.4
-2.9
-3.0
-0.2
+0.0
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-1.1
-1.3
-1.6
-0.2
-0.0
stress
R2A with Nalidixic 0.02 mM
+0.8
-2.3
-2.1
-0.4
-0.1
phage
AgroPhage_F04
-0.2
+0.1
-0.1
-3.0
-0.0
stress
R2A with Nalidixic 0.02 mM
+1.1
-2.2
-2.3
+0.5
-0.1
carbon source
D-Saccharic potassium salt (C)
+0.2
-0.1
-0.1
-1.9
-0.8
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-0.4
-0.8
-0.7
-0.6
+0.1
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.1
+0.1
-2.5
-0.1
phage
AgroPhage_C10
+0.0
-0.1
+0.1
-2.7
+0.4
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.7
-0.7
-0.9
+0.0
-0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.6
+0.2
+0.4
-1.8
-0.5
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.2
-0.1
-2.1
-0.4
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.0
-0.0
-1.5
-0.6
Atjh15
-0.4
+0.1
+0.2
-2.3
+0.3
in planta
Bethi_Library_OD0.05
-0.2
+0.0
-0.1
-2.2
+0.4
stress
R2A with hypochlorite 6.25 mM
-0.5
-0.5
-0.4
-0.7
+0.2
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-0.6
-0.8
-0.9
+0.6
-0.0
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.3
+0.2
-1.8
-0.4
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.1
+0.2
-1.6
-0.7
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.1
+0.2
-1.4
-0.5
stress
R2A with Tetracycline 0.002 mM
+0.5
+0.3
+0.2
-2.0
-0.2
stress
R2A with Bacitracin 0.6 mM
+0.9
-0.9
-0.7
+0.2
-0.1
stress
R2A with Bacitracin 0.6 mM
+1.0
-1.2
-0.9
+0.6
+0.0
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.5
+0.2
-1.5
+0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
+0.3
+0.3
-0.7
-0.7
nitrogen source
DL-2-Aminobutyric (N)
-0.5
+0.2
+0.1
+0.3
+1.8
stress
R2A with m-arsenite 0.8 mM
+2.0
+1.8
+1.0
-0.8
-0.1
stress
R2A with m-arsenite 0.8 mM
+2.4
+2.4
+1.5
-0.1
-0.0
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