Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2471 and Atu2472 are separated by 61 nucleotidesAtu2472 and Atu2473 are separated by 184 nucleotidesAtu2473 and Atu2474 are separated by 138 nucleotidesAtu2474 and Atu2475 overlap by 8 nucleotides Atu2471: Atu2471 - hypothetical protein, at 2,439,351 to 2,440,868 Atu2471 Atu2472: Atu2472 - hypothetical protein, at 2,440,930 to 2,441,274 Atu2472 Atu2473: Atu2473 - ABC transporter, substrate binding protein, at 2,441,459 to 2,442,397 Atu2473 Atu2474: Atu2474 - ABC transporter, membrane spanning protein, at 2,442,536 to 2,443,564 Atu2474 Atu2475: Atu2475 - ABC transporter, membrane spanning protein, at 2,443,557 to 2,444,525 Atu2475
Group Condition Atu2471 Atu2472 Atu2473 Atu2474 Atu2475
stress Pyrogallol 0.5 mM -0.2 +0.0 -1.5 -1.5 -1.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -3.8 -0.2 +0.1 -0.5
stress Pyrogallol 0.5 mM -0.1 +0.4 -1.3 -1.7 -1.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -2.0 -0.0 -0.1 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -2.0 -0.3 +0.2 +0.4
nitrogen source DL-2-Aminobutyric (N) -0.5 -1.1 +0.1 -0.1 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.8 +0.1 -0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +1.1 +0.1 -0.6 -0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.9 +0.1 +0.1 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +1.0 -0.1 +0.3 -0.6
stress R2A with m-arsenite 0.8 mM -0.2 +1.1 -0.4 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +1.4 -0.1 -0.0 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.9 -0.1 -0.2 +0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.8 +0.0 -0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +1.2 +0.1 -0.1 -0.3
phage AgroPhage_D04 +0.0 +1.2 +0.2 -0.1 -0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +1.7 +0.1 -0.0 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.7 +0.2 +0.4 +0.3
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +1.6 +0.1 +0.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +1.1 +0.3 +0.2 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.9 +0.5 +0.1 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +1.3 +0.1 -0.1 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +1.3 +0.5 +0.0 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.9 +0.3 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +1.6 +0.0 -0.1 +0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.3 +0.6 +0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.9 +0.1 +0.1 +0.4
phage AgroPhage_C04 -0.3 +2.3 -0.0 +0.1 +0.4
phage AgroPhage_C10 -0.0 +2.1 -0.0 -0.1 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +3.6 +0.5 +0.2 +0.6
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