Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2469 and Atu2470 overlap by 4 nucleotidesAtu2470 and Atu2471 are separated by 106 nucleotidesAtu2471 and Atu2472 are separated by 61 nucleotidesAtu2472 and Atu2473 are separated by 184 nucleotides Atu2469: Atu2469 - hypothetical protein, at 2,437,809 to 2,438,753 Atu2469 Atu2470: Atu2470 - hypothetical protein, at 2,438,750 to 2,439,244 Atu2470 Atu2471: Atu2471 - hypothetical protein, at 2,439,351 to 2,440,868 Atu2471 Atu2472: Atu2472 - hypothetical protein, at 2,440,930 to 2,441,274 Atu2472 Atu2473: Atu2473 - ABC transporter, substrate binding protein, at 2,441,459 to 2,442,397 Atu2473
Group Condition Atu2469 Atu2470 Atu2471 Atu2472 Atu2473
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 +0.3 -3.8 -0.2
stress Pyrogallol 0.5 mM -0.1 +0.1 -0.2 +0.0 -1.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.8 -0.1 -2.0 -0.3
nitrogen source DL-2-Aminobutyric (N) +0.2 -0.3 -0.5 -1.1 +0.1
phage phage 99.2 +0.3 -0.2 -0.0 -1.1 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.9 -0.0 -2.0 -0.0
stress Pyrogallol 0.5 mM -0.1 +0.2 -0.1 +0.4 -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.6 -0.6 -0.4 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 +0.4 -0.9 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.7 +0.1 +0.9 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.5 +0.3 -1.0 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.5 -0.1 +1.1 -0.2
nophagecontrol No phage control -0.3 -0.4 +0.3 +0.5 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +1.0 +0.2 -0.5 +0.1
stress R2A with m-arsenite 0.8 mM +0.2 +0.0 -0.2 +1.1 -0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.4 +0.2 +1.2 +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 -0.2 +1.7 +0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.3 -0.1 +1.6 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 -0.4 +1.4 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -0.2 +1.3 +0.1
phage phage 95.1 -0.2 +0.6 +0.1 +0.8 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.2 +0.5 +0.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.9 +0.1 +0.5 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.3 +0.0 +1.6 +0.0
phage AgroPhage_C10 -0.4 +0.2 -0.0 +2.1 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.2 +0.9 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -0.0 +1.3 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 +0.7 +0.9 +0.1
phage AgroPhage_C04 -0.1 +0.8 -0.3 +2.3 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 -0.1 +3.6 +0.5
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