Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2458 and Atu2459 overlap by 4 nucleotidesAtu2459 and Atu2460 overlap by 4 nucleotidesAtu2460 and Atu2461 are separated by 186 nucleotidesAtu2461 and Atu2462 are separated by 10 nucleotides Atu2458: Atu2458 - ABC transporter, nucleotide binding/ATPase protein (hemin), at 2,428,220 to 2,429,002 Atu2458 Atu2459: Atu2459 - ABC transporter, membrane spanning protein (hemin), at 2,428,999 to 2,430,087 Atu2459 Atu2460: Atu2460 - ABC transporter, substrate binding protein (hemin), at 2,430,084 to 2,430,977 Atu2460 Atu2461: Atu2461 - hypothetical protein, at 2,431,164 to 2,431,511 Atu2461 Atu2462: Atu2462 - hypothetical protein, at 2,431,522 to 2,432,046 Atu2462
Group Condition Atu2458 Atu2459 Atu2460 Atu2461 Atu2462
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -0.4 -0.3 -0.9
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 -0.1 -0.5 -1.8
lb control LB control -0.1 -0.2 -0.0 -0.4 -1.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.1 -0.0 -0.6 -1.0
phage phage 100.3 -0.2 +0.0 -0.1 -0.3 -1.1
phage AgroPhage_C04 -0.8 -0.3 -0.1 +0.4 -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.2 +0.0 -0.4 -0.9
phage phage 100.2 -0.2 +0.0 -0.2 -0.1 -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.2 -0.1 -0.4 -1.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.1 +0.1 -0.3 -1.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 +0.2 +0.0 +0.1 -0.9
lb_sorghum x54 243 LB_Sorghum X54 243 -0.3 +0.1 +0.1 -0.2 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 +0.2 -0.1 -1.0
phage AgroPhage_C10 -0.1 -0.4 +0.2 +0.2 -1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 -0.2 -0.9 +0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.1 +0.2 -1.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 +0.3 -0.1 -1.0
stress R2A with tungstate 375 mM +0.2 +0.2 -0.1 -0.3 -0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.1 -0.3 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 -0.2 +0.5 -0.6
phage AgroPhage_D04 -0.2 +0.2 +0.4 +0.2 -0.7
phage AgroPhage_D10 +0.2 -0.1 +0.1 +0.6 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 +0.4 +0.5 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 +0.3 -0.2 +0.7
nitrogen source DL-2-Aminobutyric (N) +0.6 -0.4 +0.6 -0.4 +0.2
carbon source D-Saccharic potassium salt (C) -0.2 -0.2 +0.1 +0.0 +1.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 +0.1 +0.2 +0.2 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 -0.1 -0.3 +0.2 +0.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.2 +0.1 -0.1 +1.4
phage AgroPhage_F04 -0.4 +0.0 +0.2 +0.6 +1.0
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