Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2450 and Atu2451 are separated by 350 nucleotidesAtu2451 and Atu2452 are separated by 58 nucleotidesAtu2452 and Atu2453 are separated by 242 nucleotidesAtu2453 and Atu2454 are separated by 163 nucleotides Atu2450: Atu2450 - hypothetical protein, at 2,421,984 to 2,422,307 Atu2450 Atu2451: Atu2451 - hypothetical protein, at 2,422,658 to 2,423,242 Atu2451 Atu2452: Atu2452 - hypothetical protein, at 2,423,301 to 2,423,915 Atu2452 Atu2453: Atu2453 - aromatic compounds dioxygenase, at 2,424,158 to 2,425,102 Atu2453 Atu2454: Atu2454 - iron-chelator utilization protein, at 2,425,266 to 2,426,342 Atu2454
Group Condition Atu2450 Atu2451 Atu2452 Atu2453 Atu2454
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 -0.5 -0.7 -0.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.9 -0.2 -0.3
stress R2A with Tetracycline 0.002 mM -0.6 -0.3 -0.5 -0.1 -0.1
stress R2A with Vancomycin 0.009 mM -1.1 -0.3 -0.3 -0.0 +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.0 -0.1 -0.5 -0.1 +0.0
stress Erythromycin 6.25 ug/mL -0.9 -0.1 -0.4 +0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.5 +0.3 -0.7 +0.0 +0.1
stress R2A with Chloride 700 mM +0.4 -0.7 -0.2 -0.4 +0.0
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.4 -1.5 -0.1 +0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.6 -0.7 -0.3 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 +0.7 -0.3 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 -0.3 +0.4 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 +0.8 +0.1 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.4 -1.1 +0.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +0.2 -0.6 +0.2 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.5 +0.8 -0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.4 +0.9 -0.3 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 +0.0 -0.1 -0.2 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 +1.0 +0.5 -0.3
phage AgroPhage_E04 +0.8 +0.0 +0.8 -0.3 -0.1
phage AgroPhage_F10 -0.1 -0.2 +1.3 -0.2 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 -0.3 -0.1 +0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 -0.4 +0.6 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.7 +0.7 +0.2 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 +1.2 +0.3 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.8 -0.1 -0.0 -0.2 -0.0
no phage P2L5 +1.0 -0.1 +0.3 +0.2 +0.3
phage AgroPhage_E10 +1.1 +0.2 +1.1 -0.3 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.9 +0.1 +0.1 -0.0 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 +0.2 +0.6 +0.3 +0.0
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