Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2446 and Atu2447 are separated by 64 nucleotidesAtu2447 and Atu2448 are separated by 220 nucleotidesAtu2448 and Atu2449 are separated by 93 nucleotidesAtu2449 and Atu2450 are separated by 1 nucleotides Atu2446: Atu2446 - hypothetical protein, at 2,416,527 to 2,418,863 Atu2446 Atu2447: Atu2447 - adenylosuccinate synthetase, at 2,418,928 to 2,420,226 Atu2447 Atu2448: Atu2448 - hypothetical protein, at 2,420,447 to 2,421,355 Atu2448 Atu2449: Atu2449 - hypothetical protein, at 2,421,449 to 2,421,982 Atu2449 Atu2450: Atu2450 - hypothetical protein, at 2,421,984 to 2,422,307 Atu2450
Group Condition Atu2446 Atu2447 Atu2448 Atu2449 Atu2450
Atjh14 N.D. N.D. -0.4 -0.7 -0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.0 -0.3 -1.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.0 -0.5 -0.7
Atjh2 N.D. N.D. -0.2 -0.4 -0.6
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.1 -0.1 -1.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.0 -0.6 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. +0.1 -0.3 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -0.1 -0.4 -0.7
stress R2A with Vancomycin 0.009 mM N.D. N.D. -0.1 +0.2 -1.1
stress R2A with Vancomycin 0.009 mM N.D. N.D. -0.4 +0.2 -0.6
in planta Bethi_Library_OD0.01 N.D. N.D. +0.1 -0.1 -0.9
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.1 +0.2 -0.8
stress Erythromycin 12.5 ug/mL N.D. N.D. -0.1 +0.4 -0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.3 +0.5 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.2 -0.3 +0.7
phage AgroPhage_D10 N.D. N.D. -0.3 -0.1 +0.8
stress R2A with Tetracycline 0.002 mM N.D. N.D. -0.0 -0.4 +0.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.2 -0.4 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.1 -0.3 +1.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.2 -0.3 +1.1
phage phage 99.2 N.D. N.D. +0.0 -0.2 +0.8
no phage P2L5 N.D. N.D. -0.1 -0.1 +1.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.1 -0.1 +1.0
stress R2A with Ceftazidime 4 mM N.D. N.D. -0.1 +0.2 +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -0.1 +0.6 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.2 +0.2 +1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.1 +0.0 +1.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.1 -0.4 +1.9
phage AgroPhage_E10 N.D. N.D. +0.1 +0.3 +1.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.0 +0.4 +1.8
remove
Atu2446
plot		 remove
Atu2447
plot		 remove
Atu2448		 remove
Atu2449
plot		 remove
Atu2450
plot