Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2444 and Atu2445 are separated by 167 nucleotidesAtu2445 and Atu2446 are separated by 452 nucleotidesAtu2446 and Atu2447 are separated by 64 nucleotidesAtu2447 and Atu2448 are separated by 220 nucleotides Atu2444: Atu2444 - hypothetical protein, at 2,414,180 to 2,415,004 Atu2444 Atu2445: Atu2445 - RNA polymerase sigma-32 factor, at 2,415,172 to 2,416,074 Atu2445 Atu2446: Atu2446 - hypothetical protein, at 2,416,527 to 2,418,863 Atu2446 Atu2447: Atu2447 - adenylosuccinate synthetase, at 2,418,928 to 2,420,226 Atu2447 Atu2448: Atu2448 - hypothetical protein, at 2,420,447 to 2,421,355 Atu2448
Group Condition Atu2444 Atu2445 Atu2446 Atu2447 Atu2448
stress R2A with Vancomycin 0.009 mM -0.5 N.D. N.D. N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.6 N.D. N.D. N.D. -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. N.D. -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. N.D. N.D. -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.5 N.D. N.D. N.D. -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. N.D. -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. N.D. -0.3
stress R2A with Tetracycline 0.002 mM -0.6 N.D. N.D. N.D. +0.1
carbon source Sucrose (C) -0.5 N.D. N.D. N.D. -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 N.D. N.D. N.D. -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. N.D. N.D. -0.1
nitrogen source D-Alanine (N) -0.5 N.D. N.D. N.D. -0.1
stress R2A with m-arsenite 0.8 mM -0.4 N.D. N.D. N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 N.D. N.D. N.D. +0.1
phage Phage 100.1 + bacteria -0.4 N.D. N.D. N.D. +0.1
nitrogen source L-Pipecolic Acid (N) -0.5 N.D. N.D. N.D. +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. N.D. N.D. +0.3
carbon source L-ascorbate (C) -0.3 N.D. N.D. N.D. +0.3
stress R2A with nitrate 375 mM +0.3 N.D. N.D. N.D. -0.3
phage AgroPhage_D10 +0.3 N.D. N.D. N.D. -0.3
phage AgroPhage_D07 +0.5 N.D. N.D. N.D. -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. N.D. -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. N.D. N.D. -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 N.D. N.D. N.D. -0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 N.D. N.D. N.D. +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 N.D. N.D. N.D. +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. N.D. +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. N.D. +0.1
remove
Atu2444
plot		 remove
Atu2445
plot		 remove
Atu2446		 remove
Atu2447
plot		 remove
Atu2448
plot