Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2414 and Atu2415 are separated by 341 nucleotidesAtu2415 and Atu2416 are separated by 489 nucleotidesAtu2416 and Atu2417 are separated by 162 nucleotidesAtu2417 and Atu2418 are separated by 43 nucleotides Atu2414: Atu2414 - ABC transporter, substrate binding protein (urea/amide), at 2,384,166 to 2,385,455 Atu2414 Atu2415: Atu2415 - glutamine synthetase translation inhibitor, at 2,385,797 to 2,385,994 Atu2415 Atu2416: Atu2416 - glutamine synthetase, at 2,386,484 to 2,387,518 Atu2416 Atu2417: Atu2417 - putative gluconate 5-dehydrogenase, at 2,387,681 to 2,388,451 Atu2417 Atu2418: Atu2418 - two component sensor kinase, at 2,388,495 to 2,391,890 Atu2418
Group Condition Atu2414 Atu2415 Atu2416 Atu2417 Atu2418
nitrogen source L-Threonine (N) +0.0 N.D. -1.5 -0.1 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. -0.2 -0.9 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. -0.1 -0.5 -0.1
nitrogen source Glycine (N) -0.0 N.D. -1.2 +0.0 +0.0
nitrogen source L-Threonine (N) -0.1 N.D. -1.3 +0.1 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. -0.4 -0.4 +0.0
nitrogen source L-Arginine (N) -0.1 N.D. -0.5 -0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. +0.1 -0.7 -0.1
nitrogen source Glycine (N) +0.1 N.D. -1.1 +0.1 +0.0
nitrogen source Choline chloride (N) -0.2 N.D. -0.7 +0.1 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. -0.1 -0.4 +0.1
nitrogen source Ethanolamine (N) -0.1 N.D. -0.8 +0.2 +0.1
stress Chloramphenicol 12.5 ug/mL +0.6 N.D. -0.2 -0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. +0.2 -0.3 -0.1
phage AgroPhage_E10 +0.5 N.D. -0.1 -0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 N.D. -0.3 +0.4 -0.1
phage AgroPhage_F10 +0.1 N.D. -0.3 +0.5 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. +0.3 +0.5 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. +0.4 +0.4 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. +0.3 -0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 N.D. +0.3 -0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 N.D. +0.2 +0.5 +0.2
stress R2A with m-arsenite 0.8 mM -0.0 N.D. +0.8 -0.1 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. +0.3 +0.4 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 N.D. +0.1 +0.3 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. +0.1 +0.6 +0.1
stress R2A with m-arsenite 0.8 mM +0.1 N.D. +0.6 +0.2 +0.0
Atjh14 +0.6 N.D. +0.0 +0.4 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. -0.1 +1.4 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 N.D. +0.0 +0.5 -0.1
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