Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2397 and Atu2398 are separated by 42 nucleotidesAtu2398 and Atu2399 are separated by 226 nucleotidesAtu2399 and Atu2400 are separated by 155 nucleotidesAtu2400 and Atu2401 are separated by 11 nucleotides Atu2397: Atu2397 - urease accessory protein, at 2,370,167 to 2,370,799 Atu2397 Atu2398: Atu2398 - urease accessory protein, at 2,370,842 to 2,371,417 Atu2398 Atu2399: Atu2399 - hypothetical protein, at 2,371,644 to 2,372,180 Atu2399 Atu2400: Atu2400 - hypothetical protein, at 2,372,336 to 2,373,001 Atu2400 Atu2401: Atu2401 - urease alpha subunit, at 2,373,013 to 2,374,722 Atu2401
Group Condition Atu2397 Atu2398 Atu2399 Atu2400 Atu2401
nitrogen source L-Arginine (N) -3.3 -2.3 +0.0 +0.1 -2.9
nitrogen source L-Arginine (N) -2.9 -2.2 +0.0 +0.2 -3.0
nitrogen source L-Ornithine (N) -1.7 -1.1 -0.1 +0.2 -1.7
nitrogen source L-Ornithine (N) -1.6 -0.9 -0.0 +0.2 -1.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -2.0 -0.2 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.0 -1.3 -0.5 +0.1
nitrogen source D-Lysine (N) -0.5 -0.8 +0.1 +0.1 -0.7
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 -0.8 -0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -1.9 +0.0 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 -0.8 +0.0 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -1.3 -0.3 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.9 -0.4 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -1.4 -0.2 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.1 -1.5 -0.3 +0.4
nitrogen source D-Lysine (N) -0.5 -0.5 +0.2 +0.1 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 -1.0 -0.4 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 -1.6 +0.5 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 -1.1 -0.1 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -1.1 +0.4 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.0 -1.8 -0.0 +0.1
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -1.0 -0.4 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -1.7 +0.6 -0.1
phage AgroPhage_D10 -0.5 +0.4 -0.5 -0.2 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 -1.2 -0.0 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.3 -1.0 +0.4 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 -0.6 -0.2 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.0 -0.7 +0.8 +0.0
phage AgroPhage_C04 -0.2 -0.1 +0.8 +0.6 +0.1
phage AgroPhage_H10 -0.2 +0.1 +0.4 +0.7 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.4 -0.2 +0.8 +0.1
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