Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2395 and Atu2396 are separated by 3 nucleotidesAtu2396 and Atu2397 are separated by 257 nucleotidesAtu2397 and Atu2398 are separated by 42 nucleotidesAtu2398 and Atu2399 are separated by 226 nucleotides Atu2395: Atu2395 - metal dependent hydrolase, at 2,368,470 to 2,369,294 Atu2395 Atu2396: Atu2396 - urease accessory protein, at 2,369,298 to 2,369,909 Atu2396 Atu2397: Atu2397 - urease accessory protein, at 2,370,167 to 2,370,799 Atu2397 Atu2398: Atu2398 - urease accessory protein, at 2,370,842 to 2,371,417 Atu2398 Atu2399: Atu2399 - hypothetical protein, at 2,371,644 to 2,372,180 Atu2399
Group Condition Atu2395 Atu2396 Atu2397 Atu2398 Atu2399
nitrogen source L-Arginine (N) +0.4 -3.7 -2.9 -2.2 +0.0
nitrogen source L-Arginine (N) +0.1 -2.8 -3.3 -2.3 +0.0
nitrogen source L-Ornithine (N) -0.0 -1.9 -1.7 -1.1 -0.1
nitrogen source L-Ornithine (N) +0.2 -1.5 -1.6 -0.9 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 +0.1 -0.4 -2.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.3 +0.2 -0.1 -1.4
nitrogen source D-Lysine (N) -0.1 -0.9 -0.5 -0.8 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.3 -0.2 +0.2 -0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -0.5 -0.3 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.1 -0.1 +0.0 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 +0.1 +0.3 -1.7
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.0 -0.1 -1.5
phage AgroPhage_D10 -0.5 -0.2 -0.5 +0.4 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 +0.1 +0.2 -0.8
nitrogen source D-Lysine (N) +0.3 -0.8 -0.5 -0.5 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 -0.1 +0.0 -1.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 -0.0 +0.2 -1.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 +0.6 +0.0 -1.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.7 +0.0 -0.4 -1.1
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -0.1 +0.4 -1.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.1 +0.2 -1.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.8 +0.3 +0.1 -1.9
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.2 -0.1 -1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.4 -0.2 +0.3 -1.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.5 +0.1 -0.3 -1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +1.2 +0.1 +0.1 -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.1 +0.1 -0.6 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 +1.0 +0.2 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.7 +0.4 +0.5 -0.3
phage AgroPhage_E10 +0.2 +1.1 +0.1 +0.5 +0.1
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