Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2370 and Atu2371 overlap by 4 nucleotidesAtu2371 and Atu2372 are separated by 176 nucleotidesAtu2372 and Atu2373 are separated by 8 nucleotidesAtu2373 and Atu2374 are separated by 24 nucleotides Atu2370: Atu2370 - hypothetical protein, at 2,343,365 to 2,344,450 Atu2370 Atu2371: Atu2371 - endo-1,4-beta-xylanase, at 2,344,447 to 2,345,514 Atu2371 Atu2372: Atu2372 - UDP-hexose transferase, at 2,345,691 to 2,346,635 Atu2372 Atu2373: Atu2373 - UDP-hexose transferase, at 2,346,644 to 2,347,588 Atu2373 Atu2374: Atu2374 - hypothetical protein, at 2,347,613 to 2,347,954 Atu2374
Group Condition Atu2370 Atu2371 Atu2372 Atu2373 Atu2374
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.5 -1.3 -1.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.0 -1.2 -1.3 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 +0.0 -0.9 -1.5 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.1 -1.3 -1.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.3 -0.8 -1.3 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 -0.4 -0.3 -1.0 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 -0.0 -1.0 -1.0 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.0 +0.0 -0.8 -1.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.1 -0.1 -0.9 -0.9 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.0 -0.6 -1.3 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.0 -0.2 -1.0 -1.0 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 +0.1 -1.0 -1.0 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.2 -1.2 -0.9 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 -0.2 -0.7 -0.6 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.8 -0.1 -0.9 -1.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 -0.1 -1.0 -1.1 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -0.1 -1.0 -0.7 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.9 +0.0 -0.8 -0.9 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 -0.0 -0.6 -0.7 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 +0.1 -0.5 -1.0 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -0.2 -0.8 -0.8 +0.1
carbon source L-ascorbate (C) -1.4 -0.6 -0.1 +0.2 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 +0.3 -0.6 -0.6 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.2 +1.2 +0.6 +0.1
stress Erythromycin 12.5 ug/mL +0.7 +0.5 +0.6 +0.6 -0.1
stress R2A with Vancomycin 0.009 mM -0.0 +1.5 +0.5 +0.4 +0.1
nitrogen source D-Lysine (N) +0.5 -0.0 +0.9 +0.9 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.1 +1.4 +1.3 +0.1
stress Erythromycin 12.5 ug/mL +1.1 +0.4 +0.8 +0.8 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.2 -0.1 +0.6 +2.1 +1.3
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