Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2351 and Atu2352 are separated by 55 nucleotidesAtu2352 and Atu2354 are separated by 257 nucleotidesAtu2354 and Atu2355 are separated by 522 nucleotidesAtu2355 and Atu2356 are separated by 127 nucleotides Atu2351: Atu2351 - hypothetical protein, at 2,328,053 to 2,328,529 Atu2351 Atu2352: Atu2352 - hypothetical protein, at 2,328,585 to 2,328,848 Atu2352 Atu2354: Atu2354 - transcriptional regulator, MarR family, at 2,329,106 to 2,329,612 Atu2354 Atu2355: Atu2355 - tRNA-Arg, at 2,330,135 to 2,330,211 Atu2355 Atu2356: Atu2356 - exopolysaccharide production protein, at 2,330,339 to 2,331,772 Atu2356
Group Condition Atu2351 Atu2352 Atu2354 Atu2355 Atu2356
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -1.3 -1.1 N.D. -0.5
phage AgroPhage_D04 -0.2 -2.1 +0.2 N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.0 -1.5 +0.1 N.D. -0.1
phage phage 100.2 -0.0 -1.6 -0.0 N.D. +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.3 -0.3 N.D. -0.2
phage AgroPhage_A05 -0.3 -1.0 +0.2 N.D. -0.4
phage AgroPhage_F10 -0.5 -1.2 +0.2 N.D. +0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.3 -0.1 N.D. +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.9 +0.6 N.D. -0.3
stress R2A with Tetracycline 0.002 mM -0.0 +0.5 -1.4 N.D. +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.0 +0.5 N.D. +0.1
stress R2A with Gallium(III) chloride 0.02 mM -0.4 -1.0 +0.6 N.D. +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.8 +0.7 N.D. +0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.5 -0.9 N.D. +0.2
phage AgroPhage_C04 +0.4 -1.2 +0.2 N.D. +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.8 -0.3 N.D. -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 -0.6 N.D. +0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.0 +0.6 N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 -0.6 -0.6 N.D. +0.2
phage AgroPhage_B01 +0.1 -0.9 +0.7 N.D. -0.2
nophagecontrol No phage control +0.1 -1.5 +1.2 N.D. +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.5 +0.0 N.D. -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.7 +0.4 N.D. +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.5 +0.9 N.D. -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +1.5 N.D. -0.1
stress R2A with molybdate 400 mM +0.1 -0.4 +1.1 N.D. +0.2
stress R2A with selenate 630 mM -0.3 +0.7 +0.7 N.D. -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +1.2 N.D. +0.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +2.0 -0.0 N.D. -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.8 +2.3 N.D. +0.0
remove
Atu2351
plot		 remove
Atu2352
plot		 remove
Atu2354		 remove
Atu2355
plot		 remove
Atu2356
plot