Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu2349	Atu2350	Atu2351	Atu2352	Atu2354
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.9	+0.1	-0.6	-1.3	-1.1
carbon source	D-Glucose (C)	-2.2	+0.5	-0.1	-0.7	-0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.5	+0.3	+0.2	-0.5	-0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.0	-0.1	-1.8	+0.7
carbon source	L-Arabinose (C)	-1.5	-0.6	+0.1	+0.6	-0.3
carbon source	D-Glucose (C)	-1.9	+0.9	+0.1	-0.6	+0.0
carbon source	D-Glucose (C)	-1.5	+0.8	+0.1	-0.5	-0.3
phage	AgroPhage_C10	-1.4	+0.2	+0.4	-0.8	+0.4
carbon source	D-Glucose (C)	-2.1	+0.9	+0.0	+0.1	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.4	+0.0	+0.1	-0.6	+1.2
nophagecontrol	No phage control	-0.3	-0.0	+0.1	-1.5	+1.2
carbon source	D-Glucosamine Hydrochloride (C)	-1.2	+1.3	+0.0	-0.4	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.3	+0.1	-0.2	-1.0	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	+2.2	-0.1	-0.0	-1.1	-0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+1.8	+0.2	-0.3	-0.9	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+1.7	-0.0	-0.3	-0.9	+0.6
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.1	-0.1	-0.6	+1.5
stress	R2A with m-arsenite 0.8 mM	+2.8	-1.2	-0.2	+0.8	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	+2.7	-0.1	-0.1	-0.7	+0.6
stress	R2A with m-arsenite 0.8 mM	+3.3	-1.0	-0.3	+0.0	+0.6
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+2.8	-0.1	-0.0	+0.2	-0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+2.4	-0.2	-0.3	+0.7	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	+2.0	+0.0	-0.1	+0.7	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	+3.1	+0.1	-0.1	-0.4	+0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.9	+0.1	+0.1	+0.4	+0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+2.7	+0.2	-0.3	+0.3	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	+3.6	-0.2	-0.4	-0.1	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	+3.2	-0.1	-0.4	-0.1	+0.8
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	+0.1	-0.3	+0.8	+2.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.9	-0.4	-0.2	+0.5	+0.6