Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2346 and Atu2347 overlap by 4 nucleotidesAtu2347 and Atu2348 are separated by 90 nucleotidesAtu2348 and Atu2349 are separated by 35 nucleotidesAtu2349 and Atu2350 are separated by 127 nucleotides Atu2346: Atu2346 - ABC transporter, membrane spanning protein (sugar), at 2,322,833 to 2,324,029 Atu2346 Atu2347: Atu2347 - ABC transporter, nucleotide binding/ATPase protein (sugar), at 2,324,026 to 2,325,564 Atu2347 Atu2348: Atu2348 - sugar binding protein, at 2,325,655 to 2,326,719 Atu2348 Atu2349: Atu2349 - hypothetical protein, at 2,326,755 to 2,326,937 Atu2349 Atu2350: Atu2350 - transcriptional regulator, LysR family, at 2,327,065 to 2,327,979 Atu2350
Group Condition Atu2346 Atu2347 Atu2348 Atu2349 Atu2350
in planta Bethi_Library_OD0.01 -3.3 -3.8 -0.9 -0.9 -0.2
in planta Bethi_Library_OD0.01 -2.7 -3.5 -1.6 -0.8 -0.0
in planta Bethi_Library_OD0.05 -2.4 -2.7 -1.8 -1.0 -0.2
in planta Bethi_Library_OD0.01 -3.2 -4.1 -0.7 +0.1 -0.2
in planta Bethi_Library_OD0.01 -3.5 -4.0 -1.1 +0.8 -0.1
in planta Bethi_Library_OD0.05 -2.3 -2.9 -1.6 -0.6 -0.1
carbon source L-Arabinose (C) -2.0 -1.9 -1.6 -1.5 -0.6
in planta Bethi_Library_OD0.05 -3.0 -3.4 -0.9 -0.1 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -4.9 -4.4 +0.4 +1.8 -0.2
in planta Bethi_Library_OD0.01 -2.5 -3.3 -0.7 -0.5 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.1 -3.4 -0.9 +0.5 -0.3
in planta Bethi_Library_OD0.1 -2.8 -2.3 -1.0 -0.8 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.6 -3.9 -0.5 +1.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.7 -3.6 -0.1 +0.6 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -4.7 -5.1 +0.8 +2.1 +0.1
carbon source D-Glucose (C) -1.8 -1.6 -1.8 -2.2 +0.5
carbon source D-Glucose (C) -1.9 -1.8 -1.8 -2.1 +0.9
carbon source D-Glucose (C) -1.8 -2.0 -1.9 -1.3 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.9 -3.3 -0.5 +1.4 -0.1
carbon source D-Glucose (C) -1.7 -1.7 -2.0 -1.9 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.9 -3.0 -0.8 +0.9 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -3.4 -2.9 +0.9 +2.2 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -2.6 -2.9 +1.4 +1.7 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -2.2 -3.0 +1.2 +2.0 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -3.7 -3.2 +2.3 +3.6 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.9 -2.5 +1.7 +2.7 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -2.0 -2.3 +1.7 +3.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -2.1 -2.2 +2.4 +3.2 -0.1
stress R2A with m-arsenite 0.8 mM +2.8 +2.7 +2.9 +2.8 -1.2
stress R2A with m-arsenite 0.8 mM +2.9 +3.0 +3.1 +3.3 -1.0
remove
Atu2346
plot		 remove
Atu2347
plot		 remove
Atu2348		 remove
Atu2349
plot		 remove
Atu2350
plot