Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu2346	Atu2347	Atu2348	Atu2349	Atu2350
carbon source	L-Arabinose (C)	-2.0	-1.9	-1.6	-1.5	-0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-4.9	-4.4	+0.4	+1.8	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-3.1	-3.4	-0.9	+0.5	-0.3
carbon source	L-Arabinose (C)	-1.8	-1.9	-1.6	-1.3	-0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-3.6	-3.9	-0.5	+1.1	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-3.7	-3.6	-0.1	+0.6	-0.1
carbon source	D-Glucose (C)	-1.8	-1.6	-1.8	-2.2	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-4.7	-5.0	+0.8	+2.1	+0.1
carbon source	D-Glucose (C)	-1.9	-1.8	-1.8	-2.1	+0.9
carbon source	D-Glucose (C)	-1.8	-2.0	-1.9	-1.3	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-3.9	-3.3	-0.5	+1.4	-0.1
carbon source	D-Glucose (C)	-1.6	-1.6	-2.0	-1.9	+0.9
carbon source	methyl-beta-L-arabinopyranoside (C)	-1.7	-1.8	-1.3	-1.2	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-2.9	-3.0	-0.8	+0.9	-0.1
carbon source	methyl-beta-L-arabinopyranoside (C)	-1.5	-1.5	-1.5	-1.4	-0.0
carbon source	D-Glucose (C)	-1.4	-1.4	-1.7	-1.5	+0.8
carbon source	D-Glucose (C)	-1.4	-1.7	-1.2	-0.8	+0.8
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-3.4	-2.9	+0.9	+2.2	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-2.6	-2.9	+1.4	+1.7	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-2.2	-1.8	+0.8	+0.9	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-2.2	-3.0	+1.2	+2.0	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-3.7	-3.2	+2.3	+3.6	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-2.9	-2.5	+1.7	+2.7	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-2.0	-2.3	+1.7	+3.1	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.0	-1.1	+1.6	+1.7	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-2.1	-2.2	+2.4	+3.2	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.0	-1.0	+1.8	+1.7	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.2	+0.6	+4.9	-0.4
stress	R2A with m-arsenite 0.8 mM	+2.8	+2.7	+2.9	+2.8	-1.2
stress	R2A with m-arsenite 0.8 mM	+2.9	+3.0	+3.1	+3.3	-1.0