Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu2342 and Atu2343 are separated by 91 nucleotidesAtu2343 and Atu2344 are separated by 224 nucleotidesAtu2344 and Atu2345 are separated by 200 nucleotidesAtu2345 and Atu2346 are separated by 68 nucleotides Atu2342: Atu2342 - hypothetical protein, at 2,319,817 to 2,320,332 Atu2342 Atu2343: Atu2343 - acetyltransferase, at 2,320,424 to 2,320,882 Atu2343 Atu2344: Atu2344 - lactoylglutathione lyase, at 2,321,107 to 2,321,517 Atu2344 Atu2345: Atu2345 - hypothetical protein, at 2,321,718 to 2,322,764 Atu2345 Atu2346: Atu2346 - ABC transporter, membrane spanning protein (sugar), at 2,322,833 to 2,324,029 Atu2346
Group Condition Atu2342 Atu2343 Atu2344 Atu2345 Atu2346
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.0 +0.2 -0.5 -0.2 -4.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.4 +0.1 -0.3 +0.0 -4.7
carbon source L-Arabinose (C) -0.2 +0.1 -0.2 -2.4 -2.0
in planta Bethi_Library_OD0.01 -0.3 -0.5 -0.4 +0.0 -3.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.5 -0.1 -0.2 +0.1 -3.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.0 -0.1 +0.0 -3.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 -0.0 -0.1 -3.9
carbon source L-Arabinose (C) +0.1 +0.1 -0.1 -2.3 -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.0 -0.1 +0.1 -3.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.0 +0.1 +0.0 +0.0 -3.7
in planta Bethi_Library_OD0.01 +0.2 -0.2 +0.1 -0.1 -3.5
in planta Bethi_Library_OD0.01 -0.2 -0.1 -0.1 +0.2 -3.2
in planta Bethi_Library_OD0.01 -0.0 -0.1 -0.7 +0.2 -2.7
in planta Bethi_Library_OD0.05 +0.2 -0.3 -0.4 -0.2 -2.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.2 -0.2 +0.0 +0.0 -2.6
carbon source methyl-beta-L-arabinopyranoside (C) +0.1 -0.3 +0.8 -1.8 -1.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +0.0 +0.1 -3.1
in planta Bethi_Library_OD0.01 -0.1 -0.4 -0.2 +0.3 -2.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +0.2 -0.0 -2.9
in planta Bethi_Library_OD0.1 -0.2 -0.3 +0.4 +0.1 -2.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.1 +0.1 -0.1 +0.0 -2.9
no phage P4L4 -0.3 -0.0 -0.4 +0.2 -2.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.6 -0.4 +0.3 +0.1 -2.2
in planta Bethi_Library_OD0.05 -0.1 -0.0 +0.3 +0.1 -3.0
carbon source methyl-beta-L-arabinopyranoside (C) +0.1 -0.0 +0.5 -1.7 -1.5
in planta Bethi_Library_OD0.05 +0.1 -0.4 +0.4 +0.2 -2.5
in planta Bethi_Library_OD0.1 +0.1 -0.3 +0.5 +0.1 -2.4
in planta Bethi_Library_OD0.05 -0.2 -0.1 +0.5 +0.2 -2.3
stress R2A with m-arsenite 0.8 mM -0.5 -0.0 -0.4 +0.1 +2.8
stress R2A with m-arsenite 0.8 mM -0.1 -0.8 +0.3 +0.2 +2.9
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